barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_38265_PI390587928Hv_44K_v2AAATATCTGAGCATCAATTTGGGCAGCATTCCTTCCATTACAAGGGAAATCGGTCACCTG558GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36639723252e-241050 - 110910060 / 60plus None
Harvest35U35_404196883e-25559 - 61810060 / 60plus



Contig Sequence (688 bp)

>U35_40419 688 Hv_44K_v2
GGTGATTATAACCTCAACTGCTTGTTATATTTGTGCTTGTTCCCTCGTAATCATCCTGTC
AGGACTAAGCCCCTAGCAAGGAGATGGCTGGCTGAAGGACTAGTATTGGGAGAACAAGAC
GCTGTGGAGAACATGAAAATTCTCGCCAACTCTAGTATCTTCAATTCCATCCGTAGAAGC
AACAATGGGGAGGTGAGGAGATGCCAACCTACAGACGTGTTGTTCCGGTACATCTCCCAA
CAGTCAACGTCCGAGAATTTCATGTTGCTTTGTGACGGCGTGGCAGCGCAACCATCGCAG
CGCAAATCGTTCCAGGCACAAGTCGCTCGCAGGCTATCCGTCCATCCTCCTGCAATTGGC
CAACTGAATCTGCCTCAGGATTTATCTCGTCTCCGGACCTTGGCGGTATTCCCTGCTGCT
GCTGGTGCGGCAAATATCGCCAGTTATGAAGCTGTTCTAGATTTCACAAAGTATGGAGTA
CTGCGGGTTTTGGACCTTGAAGAGTGTGCTCACATGAGTGAAAGTCATATCCAGGCTATC
TACAAGCAGGTGCTGATGAAATATCTGAGCATCAATTTGGGCAGCATTCCTTCCATTACA
AGGGAAATCGGTCACCTGGATCAACTGGAGACCCTCCATCTGAGTGGAACCGAAACAGTG
ACGGTGTTCAAAGAAGTCCTCCTGCTGC



Homology of Contig U35_40419 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None