barSeed
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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_38242_PI390587928Hv_44K_v2ATCTCTGAATTATTCAGATCATGTAGTACCCCCTTCTATTGTACTATGTGGAATGTGAAT76GeneList: lightyellow
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0940.1911.1072.3051.2361.112
Raw 100.633330.1631616.6005334.5701003.915972.408



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_404247133e-2577 - 13610060 / 60minus



Contig Sequence (713 bp)

>U35_40424 713 Hv_44K_v2
TTTTTTTTTTTTTTTTTAGCAGAACTATTCACATTGCTTTCATAGATATTATCAGAAGAT
AAAAAGCAGAAGAACAATTCACATTCCACATAGTACAATAGAAGGGGGTACTACATGATC
TGAATAATTCAGAGATATAACCTACACTGGTGCTGTCCAATGAATGGGTGGGTATACAAC
AATGGTGGTGGATGGGAAGGATGGATGCATGCGATGGATCCAAATTATACACAGGGAAAC
AACTACAGACCTGCACACATACATACTACACAAGCGCACACGATCATATACGCTAGAAAT
CGGCAACGACATTCTAGCTCTACGGTTTTACTTGGCGAGGATGGTGGCGCCGCAGGCGGC
CCCGGCGTGCTTTCCTTCGGCGAACACTAGGTTCCCCCTCACGAATGTCGACAGGACCTC
GCCCGATAGCTCCTTCCCAAGGTACGCCGAGATGTTCCGGTGCTTGTGGTATACGGCATG
GCTGTCGTCGAGATGGAATTGTGCCTCGGGATTCCACACCACAATGTCGGCATGGTACCC
CGGCAGAATAGACCCCTTGTTCTTCTGCCCCGCGAGCTCGGCGGGCTTCTCGCTCCACCA
TGAGGCTAGCTGGTTCAGGGTGATGCCATATTTTTTCCCATGTGACCATGTAACAGGGAG
CACAAACTGCAGAGATGAGATACCGCCCCATGCCTTCATGAAATTGCCTTCCT



Homology of Contig U35_40424 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi5g26410.15119e-79
Arabidopsis v10AT4G04955.15061e-56| Symbols: ATALN, ALN | allantoinase | chr4:2522301-2525259 REVERSE LENGTH=506