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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_38235_PI390587928Hv_44K_v2TCTGTCTTGGATGGTCATTCTGTTGAGAGTGATAACCAGAGGAGCTCAACTTCATTGGTG478GeneList: lightgreen
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.6630.5230.8191.1801.6502.227
Raw 594.451657.4781002.5902083.7001083.1661635.270



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC241716223e-25479 - 53810060 / 60plusABC24171
Harvest35U35_261346223e-25479 - 53810060 / 60plus



Contig Sequence (622 bp)

>U35_26134 622 Hv_44K_v2
CGGACTTGCTGACCCTTTTCCGACTAGCTGACCTATCGTTTCGGTGGCGTCCATCTCAGT
TCCCGTCGCTACGGTGCCGCCAGCCACCGGCATTCCATTGCCTTGGATCCGGTTGTGGTG
TGTGCTGGGAACCGTACGGTGTTGTCTGATGTGTCCTCCGAGCGGGAGGTTTGGTCGGTC
GAGGCCAGGTATGAGCAGCTCCTGGGACTGATGGATGGATGGATGGATGGATGGATGATG
TATGCATGCATGTATGTATGTATGGATACTATGGTCATGTTGCGGCCGAAATCACTGTTT
CGACCCTTCTTGGAGAAGTTCAGCACAAAATGAATAATGTTGGAAACTTATATGGGGCGA
TGATGATAAAACTTGGCTGACATAAACTTGTCGTCGATTATCCGAGGAGCTGTGGGCATA
AAAAACCTCACTCTCCCCCTCTTTTGGTACCTTTTCGTTCTCACCGAATATTGACGGCTC
TGTCTTGGATGGTCATTCTGTTGAGAGTGATAACCAGAGGAGCTCAACTTCATTGGTGGG
GGTTGATCTGGTGAAAGAAGACGGCGGAGCTAGGTTGTATGATCTATCAAAGGCGAATCT
GAGCCCCCAATAAAAAAAAAAA



Homology of Contig U35_26134 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None