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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_38232_PI390587928Hv_44K_v2GGTCATCGTTGGGAATTCTTGAAATGCACGAACATTATTTGAATTATGATGAAAATGGCA99GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.7301.0991.1570.9690.4730.487
Raw 224.394211.254207.752271.60845.85452.251



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_404296213e-25100 - 15910060 / 60minus



Contig Sequence (621 bp)

>U35_40429 621 Hv_44K_v2
TTTTTTTTTTTTTTTTTGAGACAAATGCAAACACATATATCAGCAAGGTAAAAATAATAT
TCTTATGCATATGCTATCATTAATTAACAAAACATACTTTGCCATTTTCATCATAATTCA
AATAATGTTCGTGCATTTCAAGAATTCCCAACGATGACCGCCGGCCCTCTGTTGACCGCA
AACTGGACCGGAGGCGGAGGAGCCGGAGTGGGAGCAGGAGCCGGAGCAGAACAAGGCCGA
GGAACTCTTACAGTGGCAGCCGAAGGGATCCAGACTGACGACCACGGGGTGGTGATTTCG
ATCAGCCACGCAGTGACGATCTAGATCAGAGCAAGGTGCCAACAGAGTCTAGAACTGCTG
CCGGCTGTGACGGTGAAGTGGACCGCGATGATGTCGATAAATTGCCGAGGGATCCAAAGA
TTTTTCACTCCGAGGTGGTAAATGGTGGAGGACGGCGCCAGCCATGAAGACGAAGATGCG
GTGGAACCAGAGCACGATGGTGCAAGGCCTATGAATATGAAGAGATGGAAACAGAGGCCA
ATGGTCAGGACGATGAAGTTGTTGCTGTCCTGAATGATGCAGATGTTGTTGAACTAAATG
CCAGCCACCAACTGCCCATGG



Homology of Contig U35_40429 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None