barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_38124_PI390587928Hv_44K_v2GTCATGTAATGCAAGCATCGAGTCCAAAGTGTGATCTACTCCTGTGATCAACTTGTACTG549GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_66541.17852e-24101 - 16010060 / 60minus ABC02006 ABC02008 ABC02010 ABC02012 ABC48277
MLOCMLOC_66541.211262e-24101 - 16010060 / 60minus ABC02006 ABC02008 ABC02010 ABC02012 ABC48277
JLOC1JLOC1_43862.111028e-25173 - 23210060 / 60minus
Harvest21ABC482775503e-2548 - 10710060 / 60minusABC48277
Harvest21ABC310566093e-25550 - 60910060 / 60plus
Harvest35U35_309316093e-25550 - 60910060 / 60plus
Harvest35U35_148669123e-25806 - 86510060 / 60plus



Contig Sequence (609 bp)

>U35_30931 609 Hv_44K_v2
GCAAACAGCAAAGCTTATAACACATCCGAAGCATCATCCATCCCCTGAGTTGACAGCTTC
CTAATCGCAGTTCCTCCTCGCCCAAATCGAGCAGCCATGTCGCTGATTCCCCGCGGCAAC
GCCTTCGACCCCTTCTGCGTCGACCTCTGGAACCCCTTCGACGGCTTCCCCTTCGGCTCC
GGCAGCGGAACAAGGAGCAGGAGGAGAAGACGGACACCTGGCACAGGGTGGAGCGCAGCA
GCGGCAAGTTCCTGCGCAGGTTCAGGCTCCCGGAGGACGCCAAGGCGGACCAGATCAAGG
CGGCCATGGAGAACGGTGTGCTCACCGTCACTGTGCCCAAAGAGGAGGCCAAGAAACCCG
AGATCAAGTCCATCCAGATCTCCGGCTAGGCTGCTGCAAGATTAAGGTTCAGTTCGCTGC
TCTAAGGTTCAGCTCGCTCTTTTGTGCCTTTAGCTGGTGTGGATATGGGTCCGTGTTGAG
CATCAAGTGTGGCCTTGTCAGTGCTGTGTTCAATGTCCGTGTCCAGAGTTACTCATGTAA
TGCAAGTTAGTCATGTAATGCAAGCATCGAGTCCAAAGTGTGATCTACTCCTGTGATCAA
CTTGTACTG



Homology of Contig U35_30931 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None