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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_38068_PI390587928Hv_44K_v2ACACATCTTCTCCAGCTCTACGGGGGCTTAGGTTTCTAGAAAAAGAGTCGGAGTAGTTAT245GeneList: cyan
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 3.1222.4511.4270.4251.0710.260
Raw 82.14769.74551.73321.61120.3525.234



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC238915223e-25246 - 30510060 / 60plus
Harvest35U35_105925233e-25246 - 30510060 / 60plus



Contig Sequence (523 bp)

>U35_10592 523 Hv_44K_v2
GCGTCCTGCTGCTCAGCCATGTCTGTCGAGGTTTCTCCTTGCCCCCGCATCCTTTCTTCA
AGGGCATTATGAATCACTTCGGGGCACAGCTTCACCACTTTCTCCCGAACGCTATTGCCC
ATCTCTCTGCTTTCATAGTTCCGTGCGAGTGCTTCATTGGCTGTCCTCCCCATTGGGGGT
TGTTCAAGCACATATTCTCTGCTAGATCTCAAACCATCAAACGACTCAGCCAGTCGGACG
ATAAAACACATCTTCTCCAGCTCTACGGGGGCTTAGGTTTCTAGAAAAAGAGTCGGAGTA
GTTATCCTGCCCTTCAGCTGAGTGAGTCGGTCAGGAACTGGCAGTCGACGTGGTTCTACT
GCCAGGACGTTGCCTGCCCGAATGCCACGACAGGGATGCCTCCCTTTAGCTTAGATCGGC
CCGCTCCGCCTAAACAGCTTGCGCTCACGAATGCGGAGAAGAACGACATCCAGCCTCTGG
TCGACGCACTCGTAGATGTCGTCAGAAGGGGGGTCACCGGCAT



Homology of Contig U35_10592 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None