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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_37893_PI390587928Hv_44K_v2GAAGCCATTACTGTGATAGATAGCGCGCACCAGTACATCATTACATGAGATTTTTCAGCG740GeneList: darkslateblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.5521.8701.1650.6030.2440.212
Raw 826.0141533.548833.762684.69397.68390.544



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
JLOC1JLOC1_34332.129536e-212782 - 28379855 / 56plus
Harvest35U35_8128123e-25741 - 80010060 / 60plus



Contig Sequence (812 bp)

>U35_812 812 Hv_44K_v2
ATTCAGAGCGCCGGAGCAATTCAACTTAACAGCGATGGTACGTACAATATAATTCATTCA
GAGCGCCAGAACAAAGTTGACAAACAGCAGGCTTTTAAAGGATAAGACAAGATCATGAAG
TTCGTCTCAAAAGAGCATGTGCGTTGAGATTATTCATGGGGGGCAGAAGCAAAAAGTTGC
CACTGCCAGGCAGAGAAAAAGATGTTCTATAGCACAGAGATACGTCGATCCATGTCTAGT
TCACATGTCGACACGGGTCGGAACTGAGTTGTGGTCTGCACTAGTTCTTGCCCATCATGG
CTCTGTCCTGCTGCCTCAGCCAGCGGCCGCTCCCGGCTATTGGCGAGTTCTCTCCTCGCA
CTCCCCAGCCTTTCATGGAGTACGTGAGGAAGACCGTCGATGACACGCCTTACTACAAGC
GTGATGCGAGGAGGCGATTCAACCCTCAAAATACGTACTGAGCGTGTGTAAACCGGGCAG
TAGAGTCGCTGCTGCTGTGTTTCCCCCCTAGTTTATGATTTAGAAGGGTAGCCTTGTAAT
CCCTGTACTGTAAAATTCGTGTATCATCGATAGTACGCTGTCAATTTTCAAGTCGTGGCG
GCATCTGTATGAGCAATGGTTGGTTCTGAGAAAGCTATAGAGCTAGATAGATCACTCAAC
AGATGGTTTTGTAGAGTAGCTTTGTAATTGTAAAAACCTGGGAGCTCTGTATGTAAATTA
AACCTGCTTAATTTGGTCGAGAAGCCATTACTGTGATAGATAGCGCGCACCAGTACATCA
TTACATGAGATTTTTCAGCGGCCGCTCGAGCA



Homology of Contig U35_812 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None