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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_37725_PI390587928Hv_44K_v2TGGTAGGCGCTTCAGCAGGCAACAGTAAATAAAAGAGTGAGAAATTTGCGTTTTAAAAAA546GeneList: midnightblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0110.1040.6541.3461.5962.469
Raw 179.4693592.55819088.39759349.80024798.66742546.000



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC117575613e-25495 - 55410060 / 60plusABC11757
Harvest35U35_193406133e-25547 - 60610060 / 60plus



Contig Sequence (613 bp)

>U35_19340 613 Hv_44K_v2
ATTGTTTGGTACCGGGAATCGGCCATTAGGCCGGGGAGCCATTACACGCCTCGCACAATT
GTCACCAAGCATCCACGAGACCAAGGCGATGTCAATGGCGGAGGAGCAGTACTACGCTGG
CCCGCGCGCGGCCCCGCACGGGCTGCTGGTGGCGGTAGTGTTGGGGCTGCTGATTGCATG
GCCGCTTTTCCTGCAGGGTGACGGCGGCGAGGCATTCACCGATACCATCGCCGAGCTGCT
CGGCCCCGTGGGCCTGCTCCTCCTCCCTGTGGGGCTCCTCATCATCATCAGCCTCCTCTC
CTCCGACCGTGGCCCTCACATGCTCGCGTTCGGCGGCTCGCCCGACACCGTGCACCACGT
CGGGGGATCTCCCATCGGCGTGGCGCTCATGCTGGCCCTCATCCTCGCCCTCCTCTACTA
TCGGTATGCGCTCTTCGGCGGCGGCGGAGACGAAGACGAGTAGGCGACTAAGCGCCCGCC
ACCGCCAGTGGGTTTTAGGTAGAGCTAGCCTGATCTCGGTGTCGCTGGCTGGTTGTTCAG
ACATGCTGGTAGGCGCTTCAGCAGGCAACAGTAAATAAAAGAGTGAGAAATTTGCGTTTT
AAAAAAAAAAAAA



Homology of Contig U35_19340 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None