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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_3768_PI390587928Hv_44K_v2TCAAGGCATGCACATAAATAAAGACAAGGGCGTGACTGGCGTCTCTTTTCCAGTATTTTC533GeneList: midnightblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0130.1290.5491.6042.1473.432
Raw 9.743166.920588.6282677.9571214.1872115.837



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_59994.117442e-2425 - 8410060 / 60minus ABC01350 ABC01351 ABC01353 ABC01356
JLOC1JLOC1_39089.118498e-251687 - 174610060 / 60plus
Harvest21ABC0135421573e-252080 - 213910060 / 60plus
Harvest21ABC013538643e-25725 - 78410060 / 60plusABC01353
Harvest21ABC013494963e-25414 - 47310060 / 60plus
Harvest21ABC367534452e-2227 - 8110055 / 55minus
Harvest21ABC013514576e-2218 - 779758 / 60minusABC01351
Harvest35U35_143686733e-25534 - 59310060 / 60plus
Harvest35U35_1436921581e-242080 - 213810059 / 59plus



Contig Sequence (673 bp)

>U35_14368 673 Hv_44K_v2
AAGGTCAGCGGCGCGAGGAAGAGGAGGACGACCAACGGCAGCAACGTCGTCGCGGGTCCG
AGTCCGAGTCGGAGGAGGAGGAGGAGCAGCAGAGGTACGAGACGGTCCGTGCGCGGGTGT
CGCGCGGCTCGGCGTTCGTGGTGCCGCCCGGCCATCCGGTGGTGGAGATCTCGTCGTCCC
AAGGCAGCAGCAACCTCCAGGTGGTGTGCTTCGAGATCAACGCCGAGAGGAACGAGAGGG
TATGGCTCGCCGGGAGGAACAACGTGATCGGCAAGCTCGGCAGCCCCGCCCAGGAGCTCA
CGTTCGGCAGGCCGGCGAGGGAGGTGCAAGAGGTGTTCCGCGCACAGGATCAGGACGAAG
CCGTGGAGACGTTCCTGAGGATGGCAACCGGTGCGATCTGAAATGCCACCACTGTCAGTG
AGCCCGTGCCGGTTTAAGAGCTGGACTTGTGTGTGTAATACGCGGGAGTAGAATAAATAA
GTGTGGCACGGGCTCAGTACGAATGATGTAAGCTGCCTACCGACCTACTACTATCAAGGC
ATGCACATAAATAAAGACAAGGGCGTGACTGGCGTCTCTTTTCCAGTATTTTCAAAAAAA
AAAAAAAAAAAAAAAAAAAACTCGAACTAGTTCTCTCCCTCGTGCCCCCCTCACTGCAGC
NCCGGGGGATCCA



Homology of Contig U35_14368 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None