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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_37511_PI390587928Hv_44K_v2GATGCTCCGGTGGTTATGACCATATAAAAACGTGCGTGATGGAGGCCTGATGCTCCTGGT595GeneList: lightsteelblue1
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 17.7216.1231.6680.4080.0410.038
Raw 3131.3101866.424402.093165.4824.1024.175



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC348456553e-25596 - 65510060 / 60plus
Harvest35U35_388796553e-25596 - 65510060 / 60plus



Contig Sequence (655 bp)

>U35_38879 655 Hv_44K_v2
AGGCGAGATCAGTTCTTGAAAACGGAGAACGCCATGAGGAGGACTCTGTCCCTGCTCGCC
GTCCTCCTCCTCCTCCTCCTCGCCTTCCACCCGCGCAACGCTGCCGACGCCCACGCCCAC
CGGTTCCGGTTAGGCAAGGAGAAGGTCACCAACCTGCACTTCTACCTGCACGACACCCTC
AGCGGCCGGGACCCGACGGCCGTCCCCGTGGCCCGCGGCGCCGGCGCCACGCCTAGGCCC
GGCGACCCCACGCCCTTCAGCTCCGTCTACGTCGTCGACGACGTGCTCACCGAGGGCCCC
GAGCGGACGTCCAGGGTCGTCGGCAGCGCGCAGGGCCTCTACGCGTCCACGGGCAGGCAC
GCGCTGGGCCTCGTCCTCGGCATCGACTTCGCCCTCAACGACTACAACGGCAGCTCCTTC
GTCGTCTTCTCGCGCAACCCCGTCGCGGACGGCGACGGCAGGGAGCTCGCCGTCGTCGGC
GGCCGCGGCGCCTTCCGGATGGCACGCGGCTTCGCGCTGCTCCGCACGCACTACCTCAAC
ACCGGCAACGGCGACGCCATCATCGAGTACAACGTCACGCTCCTGCACCAGAGATGATGC
TCCGGTGGTTATGACCATATAAAAACGTGCGTGATGGAGGCCTGATGCTCCTGGT



Homology of Contig U35_38879 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g59440.11871e-62protein|dirigent, putative, expressed
Brachypodium v1_2Bradi1g04470.11922e-67
Arabidopsis v10None