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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_37381_PI390587928Hv_44K_v2CGAGATGGTTACCGCAACAGTGCTACATCCTGAAGGTCTTGAGATCAAATCTTCAAAAAA738GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.1261.1291.2300.9230.3490.327
Raw 465.989710.603698.499832.465110.502112.063



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_72470.18629e-22640 - 69410055 / 55plus ABC14667
MLOCMLOC_72469.113939e-22510 - 56410055 / 55minus ABC14667
JLOC1JLOC1_48200.39735e-22677 - 73110055 / 55plus
JLOC1JLOC1_48200.29195e-22623 - 67710055 / 55plus
Harvest21ABC146687042e-22632 - 68610055 / 55plus
Harvest35U35_60448093e-25739 - 79810060 / 60plus



Contig Sequence (809 bp)

>U35_6044 809 Hv_44K_v2
CACCCAACCAATTCCCCATCTTCTTCGGGATCTCCTCCGCCTCCACTCACAACCTCCCTC
ATGTACCTCCTTAATTTCCACGCCGAACCAGTCCTCCCGCAGCCATCCTCTGCTTCCTTC
GCAGCTAGCGCAACCTTCTCCTCCTTGCCTTTCCCAAGCCCAAAGGAGAGCAACTCCTTC
ATGTCCCGCCTTGCTCCGATGGCCGGCGACCAGCCAAACAGCAACATCCCCGAGCATGGT
TGACCCCATCTCCACCTCGGCCATGTCGTCCCTCTCCTCCATGCCCGTAACACCTTCCCC
TGTTTCCTTCTCTCTCATAGGATCTCTCATCTCTCTGGTTCTCTGTTGTTCGCATGGAAT
TGGAGCAGCCATGGCGCTGTGCGCCCACGCTGGTGCCCGAGGCAAGCCAAGTCGCACGAG
CTTGCCTCCTCACGCCAAAGCCTCCTACCTCATCGGAGCACCGCAGCGTCGCCATTGCAG
CCCGGAGCACACCGTCAACCACCCCGATGCCATTGGGAACGGGACGGTCACCCTCGAATC
CAGTCCTCACGCCCGTCTCCGACCCCGACCGTGTGGACTCCTGTCACCGCGCTGTAGTCC
CGAACGTTGGCGCCCTATTGTTTCCCCGCCATGAGAATCTTCCCCCCTCGATCTGAACTT
CAATTCTTTCCTAGATCCATTTTGCCATGTTGATGTTATATTGTCACTGCTGTTATCCTC
CACAAGCAGTCTATTAGCCGAGATGGTTACCGCAACAGTGCTACATCCTGAAGGTCTTGA
GATCAAATCTTCAAAAAAAAAAAAAAAAA



Homology of Contig U35_6044 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None