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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_37379_PI390587928Hv_44K_v2GATTGGTGTGACTATTGGTTTCATTGGTTTGTGTTTATTTAGTGCTGAACGAATCAAACT866GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.1851.2611.4460.9330.3110.358
Raw 237.677392.730392.751400.91445.37458.492



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_68047.39913e-21913 - 9699856 / 57plus None
MLOCMLOC_68048.19433e-21865 - 9219856 / 57plus None
Harvest35U35_604610323e-25867 - 92610060 / 60plus



Contig Sequence (1032 bp)

>U35_6046 1032 Hv_44K_v2
CTCGCTGGATCGGGATCTCCCTCGATGCTGAAACACTCTATTCCAAGCTTCTTCTCCTCC
TCCCATTGAGCATAAAAAATCTGCCACCGGGGGGTCTCTCCTACCACCGAGCCCTCAACC
TCCCCGAGTTGCCTCTCCCGCCGACGAGCGCGGCTTCGCCGTCGACTCCCCAAGTTTCCT
CTCCCGCGCGTGACTGCCGCCGCGAGATGTCGCGACATCACCACTGAAGCCAGCCCGCTA
CTCCTCTCCTTACCGGAGCACATCTTCTCTACCGACTCAACGCCGACGCTCTACTTCAGC
CACTCTCCATCAGAGGTATGTGGCCTATGAATATGCCAACACAGATCTATTGAACAAGAA
GTCTGATGTCTAGAATTTTGCATGCTGCCACTCGAAATAGTGGCTGGGATGGATCGTGTA
GATTGTTGTCACCCAGTTAATGAGGTGCATCTGGTGGCGTGGCTCAAGATGATGGTGGGC
ATGAGGAGAGTTATGAGTGGTGAAGGAGTGTTTGGAAGTGTTTTGTTCTCCAGAACATAT
GTTATCTCAGAAAGCTTTTATAACATACTAATTGATGGTTTCCTGTTGTTTTTGTGAGTT
CCCGAGATCAGAGAGGCCAAGGAGAACAACACTTTCGTGTGCGGCCTCGGAGCACCATGA
CTGATTGCTAGCTAAGGCTTGAAGTTTGAACAGCAAGAGCAGCACCACGGGAACCGTCAT
CGTGGTTGACAAAACTGATGTTCCTCATCCCCCTTTCCTTCTTTCTTCTCATCTGCGATC
CTTCATGCTCTCAGAAGTTTGGAAGAGGAAGATAATGACAGCCATATCTGGAAGAGCTAG
ATGATGTAGAGATCTATCTTTTCTTTGATTGGTGTGACTATTGGTTTCATTGGTTTGTGT
TTATTTAGTGCTGAACGAATCAAACTTGTATGTAGTATCATATTTGCTTGTGTTGTGATT
TTGAATGTAGCTACATGTAATGCACTTATTGTTATAGTTGCAAAAAACATGGCTCCAAAA
AAAAAAAAAAAA



Homology of Contig U35_6046 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None