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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_37206_PI390587928Hv_44K_v2GTGCTGCTGCAGCAGGAACTAAGAAGTTCCATGAAATAACTTTATATATGTACTAGAAAT289GeneList: bisque4
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.2432.5821.5990.6790.1380.053
Raw 8100.76726372.31314064.9339658.463680.541284.563



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK3729303882e-24294 - 35310060 / 60plus ABC05564
MLOCMLOC_49138.12693e-22148 - 2069858 / 59plus ABC05564
MLOCMLOC_53095.12413e-21137 - 1939856 / 57plus ABC05564
Harvest21ABC055654413e-25277 - 33610060 / 60plus
Harvest21ABC055634503e-25290 - 34910060 / 60plus
Harvest21ABC055644525e-23272 - 3309858 / 59plusABC05564
Harvest35U35_22004763e-25290 - 34910060 / 60plus
Harvest35U35_22014525e-23272 - 3309858 / 59plus



Contig Sequence (476 bp)

>U35_2200 476 Hv_44K_v2
GAAAAATCAACCAACAACACTAGAAGAAAACAAATAACTAACTATCTCTCATGGCACATA
TGAGGAACTACACACGTCCCCTGTGCTTCATAGCTCTTATAGCCATGGCCGCCGCTTTCT
TTTCAGGTCATGCAGCAGGGAGTTACATAGATACATTTGATGATTGCACACTTGTGGACT
ATTGTTCGCCACCAGACCGAGCTAGTGGCAACATTGCGTGCAAGGCTTACTGTGCTGGCC
GAGGTTATAACAAGGATCACAGCAGTTGCGTTGAAGGCAGTAGTAGTTCGTGCTGCTGCA
GCAGGAACTAAGAAGTTCCATGAAATAACTTTATATATGTACTAGAAATATTGCTTCAAT
GTGAATGAATAAATTGTTTGTGTGAAAAAAAAAAAAAAAAATACAAAACGATCAATAAAT
AATTAATAATTCTTTATAAAAAAAAAAAAAAAAAATTTCAAAAAAAAAAAAAAAAA



Homology of Contig U35_2200 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None