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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_37200_PI390587928Hv_44K_v2CAACAATGTACCTTCTGTACGCGCATTCGGATCTGTGATTTGTGTATGAAACCCAAAAAA286GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35616419092e-241739 - 179810060 / 60plus ABC05415 ABC05416 ABC05417
MLOCAK248683.15022e-24292 - 35110060 / 60plus ABC05415 ABC05416 ABC05417
MLOCMLOC_77140.19012e-24423 - 48210060 / 60plus ABC05415 ABC05416 ABC05417
JLOC1JLOC1_51453.18258e-25358 - 41710060 / 60plus
Harvest21ABC305523203e-25128 - 18710060 / 60plus
Harvest21ABC054194743e-25270 - 32910060 / 60plus
Harvest21ABC054184743e-25281 - 34010060 / 60plus
Harvest21ABC054175703e-25366 - 42510060 / 60plusABC05417
Harvest21ABC054164633e-25287 - 34610060 / 60plusABC05416
Harvest21ABC054155023e-25249 - 30810060 / 60plusABC05415
Harvest35U35_22085583e-25281 - 34010060 / 60plus
Harvest35U35_22075703e-25366 - 42510060 / 60plus
Harvest35U35_22064913e-25287 - 34610060 / 60plus



Contig Sequence (491 bp)

>U35_2206 491 Hv_44K_v2
CAGAGAGAAGAGAAGAGGAGAGGAGAGGAGAGGAGCCCTCGACCCCGCCGCCGCAAGCCC
TCGTCTCCGATCCCGCCGTCGCCGTCGCAGCCATGCCGTTCACCCCGGGACCCTACTCCG
GCAAGAGCACCCTCGCACTCGTGGCCAGGGTCTCCGCGGTCGGCATCGGCGTCGTCTACG
GCTCCGTCAAGCTCGGCATCCTCAAGATGACCAAGCCCAAGGAGGAAGCAGCTGCTCACC
ACTGAGGATGAGGACAAGTAGCTCCAGCGGGTTGACGCCGTAGATTCAACAATGTACCTT
CTGTACGCGCATTCGGATCTGTGATTTGTGTATGAAACCCAAAAAAACCCAAGCCCATGT
GGGAGCTGAACCTTAGTTTTTTTTTTTGCTTGTGGAAAATAATATCCTCGGCTGAATCGA
CTTGAAATCAGGAAAGAGTGAAAATTAAAAAAAAAAAAAAAAATGCTGTGATTCAAAAAA
AAAAAAAAAAA



Homology of Contig U35_2206 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None