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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_37173_PI390587928Hv_44K_v2CGAGGAAAGGTTACACGACATTGCGATGTAATCTTGTTATGAGATTATTATGAGTATACA521GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_71924.17612e-24119 - 17810060 / 60minus ABC06014 ABC06015 ABC47603
MLOCMLOC_76540.19753e-21572 - 6319758 / 60plus ABC06014 ABC06015 ABC47603
JLOC1JLOC1_47828.114948e-25852 - 91110060 / 60minus
JLOC1JLOC1_51037.110782e-21667 - 7269758 / 60plus
Harvest21ABC060156163e-25522 - 58110060 / 60plusABC06015
Harvest21ABC476033396e-2227 - 869758 / 60minusABC47603
Harvest21ABC060146026e-22505 - 5649758 / 60plusABC06014
Harvest35U35_22346153e-25522 - 58110060 / 60plus
Harvest35U35_22336726e-22505 - 5649758 / 60plus



Contig Sequence (615 bp)

>U35_2234 615 Hv_44K_v2
GCTCAAGCCTCACTACACGCAGATCCTAAGCATTCGCTTGCCATCGTCTCCTCCCCCTCT
CGTTGCACCAGCGACACCAAGCAGATGGCTCGCTTCGCCGTGGTCGCAGCCATCGTCGCA
CTCCTCGCCGTCGCCGCCGCCGCGCAGGGGCCCATGCCGGCGCCTAGGATGGCCCCGCTA
CCTGCGCCTCCGGCGAGGTCCCCGGTCGCCACCGCTCCCACCGCAGCGTCGCCGTCCCCG
ATGGCCTCTCCCCCTGCCCCTACCACCGATGCCCCGACGGACGCTCCCTCCGCGATGACG
CCCTCCTCCGTCTCTGCCACACCCGAGGGAGCACCCACCCTCGCCCCGAGCGGCAACCCC
GCGAGCTCCGCCGTGTACACCTCCGCCGCCAGCTTCGGCGCAGTCGCCGGAGCAGTCGCC
GCCGCCATCTTGTTCTAGATGGACCCACGACTCTGTCTCTGCTTGCTGTTGTCTATACAG
TTTCATCATTTCTGAGATTCTTTACTGCTCGTATTACAGATCGAGGAAAGGTTACACGAC
ATTGCGATGTAATCTTGTTATGAGATTATTATGAGTATACAAATTCGTTCATTTGTAAAA
AAAAAAAAAAAAAAA



Homology of Contig U35_2234 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None