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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_3712_PI390587928Hv_44K_v2GTTTAGAATGGACTTGTGGCTGATTTTGTTGCGATTTATAGCGGTTCAAGTCCTAAAAAA968GeneList: yellow
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.3311.8271.2080.7630.3630.381
Raw 248.522303.787176.742168.63629.48133.161



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_523810373e-25969 - 102810060 / 60plus



Contig Sequence (1037 bp)

>U35_5238 1037 Hv_44K_v2
GTTCCAGCAGCATGTGTCTTTGGAGCATCCAAAGTGGATTGGCAGAATGTGCTTTCTCAT
TCTATTTATTGCACATCATCCAATGTTGTGGACTACATGATCTCTGCGCCTTCTCATGGA
GCTGTAATAGGAGCGTGGCTTGGTGCTTGGCCTATGCCCCTTGACTGGGAGAGACCTTGG
CAGGAATGGCCAATATGTGTCACTTATGGTGCAATTGCTGGGCATGTGATTGGCATACTA
GTATCACTGATCCTCGTAGTTGCTCACAAGATAAGAGTTCGTGTCAAAGCTGACTAGCCT
ATGGATGATGGACATCTTTTTTTCCCCTTTAATGATTTACGCAGGTTATACTGTAGATTA
TTTCTTCCCAAAAAGCTATGTACTTTTGGTTAGATTTCCAGTTAAGTCTATGTACTGGTG
CCTTCCAGTAGCTTGATACGTGTATTACATTAGTGGCACTCATTTACCTTTTTGGGGCTA
AAGATTATTTTCTTAAGAGCTCTATGTTATGTTATGAGACTGATTGCCGTTTGGTATTTT
AGCGGCCGCTCGAGGCTATGGTGGTGGCGGTTCACGGTTCCATGATGGAAGGGCTCGCAC
ACAGTCCGGTATGTCGTCTAGAGGTGATGGGGGTGCACGCATGGTGAGCCTGAGCAGGTA
GAGATTAGAAGGAGCATACATACAGTAGACATATCAGAGCACATCAAGTTTTGAAGCACT
CCATTAGGAAAAAGAAGTTTTGAGGCACTAGTTTTCTTCCATAAATTAGAAATCCTCCAC
GGTTCTGAACCTGTCAGGAAACTCAAATTGAGTTTTCTGATCTGAATCTGTTTGCTATTT
TTTTCTTGGTAGCTTTTGATCTGAATAAACTCAAACCGAGTTTTCTGTTTTGCATTGTGG
GAGCGAGGACCATGTGCACACTCCTACATTTGACAAAAAGGTTTACCCTATGCAGTGGTA
CTTTTTTTGTTTAGAATGGACTTGTGGCTGATTTTGTTGCGATTTATAGCGGTTCAAGTC
CTAAAAAAAAAAAAAAA



Homology of Contig U35_5238 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi1g76510.12197e-52
Arabidopsis v10None