- Probe CUST_37081_PI390587928
- Source Contig U35_586
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_37081_PI390587928 | Hv_44K_v2 | TGAGGAGGAATCCGACAAGTCCAAGTCGGAGATCAATGACGACGATGACGATGAGGGTAG | 557 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_78554.1 | 1576 | 2e-24 | 874 - 933 | 100 | 60 / 60 | plus | ABC02173 |
| MLOC | MLOC_78556.1 | 912 | 2e-24 | 577 - 636 | 100 | 60 / 60 | plus | ABC02173 ABC43476 |
| MLOC | MLOC_78556.2 | 1184 | 2e-24 | 252 - 311 | 100 | 60 / 60 | minus | ABC02173 |
| MLOC | MLOC_78556.3 | 1089 | 2e-24 | 252 - 311 | 100 | 60 / 60 | minus | ABC02173 |
| JLOC1 | JLOC1_52356.1 | 1376 | 8e-25 | 646 - 705 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC02176 | 1075 | 3e-25 | 547 - 606 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC02175 | 906 | 3e-25 | 439 - 498 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC02173 | 956 | 3e-25 | 479 - 538 | 100 | 60 / 60 | plus | ABC02173 |
| Harvest21 | ABC02172 | 676 | 3e-25 | 65 - 124 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC02171 | 640 | 3e-25 | 557 - 616 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_586 | 711 | 3e-25 | 558 - 617 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_585 | 676 | 3e-25 | 65 - 124 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_584 | 1024 | 3e-25 | 483 - 542 | 100 | 60 / 60 | plus |
Contig Sequence (711 bp)
>U35_586 711 Hv_44K_v2 TCTCCGTCCCCTTCCTTCCTTCCTTTCCCCAAACCAGACCAGGAGCGCCCTCCCCACCCC AACCCAGGTGAGCCTCCCCCGATCCGCCTCGATCCGCCCGATTCCCACCGGCCCTCGAGC GGATCTGACCGGATTTCGCGTTTTCGCCGCAGGAAACCAGCCATGAAGGGGGCCAAATCC AAGGGCGCCGCCAAGGCCGACACCAAGTTGGCGGTGAAGAGCAAGGGGGCGGAGAAGCCG GCCGCCAAGGGGAAGAAGGGAAAGGCAGGCAAGGACCCCAACAAGCCCAAGAGGGCGCCC AGCGCCTTCTTCGTCTTCATGGGCGAGTTCCGCGAGGAGTTCAAGCAGAAGAACCCCAAG AACAAGTCCGTCGCCGCCGTCGGCAAAGCGGCCGGTGAGAGGTGGAAGAGCTTGAGCGAA TCCGAAAAGGCCCCCTTTGTTGCCAAGGCCAACAAGCTCAAGGGCGAGTACAACAAGGCC ATTGCTGCCTACAACAAGGGCGAGAGCACTGCTGCTGCCCCAAAGAAGGCCGCTGCCAAG GAGGTAGAGGAGGAAGATGAGGAGGAATCCGACAAGTCCAAGTCGGAGATCAATGACGAC GATGACGATGAGGGTAGCGATGAGGACGAGGATGACGACGAGTAAAGAAGAAGCATCTTT GCTCCGGCGGACAAGGCGGGAGCTGCTGCGCGAGGCCCCTGAGCTGTGGGT
Homology of Contig U35_586 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |