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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_37065_PI390587928Hv_44K_v2TGTGGCGCTATGTGTTATATATGGATAAGAATAAAGGGAGTCTTTTCGGGGTCGCTTCTT580GeneList: midnightblue
MasterList: Pathogenesis_Function_Probe_Module



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0100.0110.6251.4692.3582.790
Raw 208.9211054.72764725.800196154.000127869.000168102.000



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_12143.19662e-24146 - 20510060 / 60minus ABC00018 ABC32432 ABC45072
JLOC1JLOC1_8132.19668e-25146 - 20510060 / 60minus
Harvest21ABC528215633e-25109 - 16810060 / 60plus
Harvest21ABC000186623e-25581 - 64010060 / 60plusABC00018
Harvest35U35_56633e-25581 - 64010060 / 60plus



Contig Sequence (663 bp)

>U35_5 663 Hv_44K_v2
GTGCATTGCAAAAAAGAAACTACACCAACGAACTTGGCCTCCATCCAAAAATATGGCGTC
CAAGTCCAGCTGCGATCTCCTCTTGGCCGCCGTCCTAGTCTCCATCTTTGCCGCCGTTGC
CGCCGTCGGCAGCGAAGATTGCACCCCATGGACGGCTACTCCGATCACTCCACTCCCAAG
TTGCCGCGACTATGTGGAACAGCAAGCATGTCGCATCGAAACGCCCGGGCCGCCGTACCT
CGCCAAGCAGCAGTGCTGCGGGGAGCTTGCAAACATCCCGCAGCAGTGCCGATGCCAAGC
GTTGCGCTTCTTCATGGGGCGGAAATCTCGTCCCGATCAGAGCGGCCTCATGGAACTCCC
CGGGTGCCCTAGGGAGGTGCAGATGGACTTCGTCAGGATACTCGTCACGCCGGGGTTCTG
CAACTTGACGACCGTTCACAACACTCCATACTGCCTCGCCATGGATGAGTGGCAGTGGAA
CTAGAGACAATTCTGTAGCTCATGAATAAATAAGCATGTTGCGACCATACATGTGCGTGA
CATGCATATATACATATATGAGCTCCTCGCGCTCATCATGTGTGGCGCTATGTGTTATAT
ATGGATAAGAATAAAGGGAGTCTTTTCGGGGTCGCTTCTTAAAAAAAAAAAAAAAAAAAA
AAA



Homology of Contig U35_5 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None