- Probe CUST_37052_PI390587928
- Source Contig U35_7145
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_37052_PI390587928 | Hv_44K_v2 | GTGGGCGTTGACTCGTAGGCCTGTGAAATTTTACAGTACGAGAATTTATCGCTGAAAAAA | 267 | GeneList: brown MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 1.934 | 2.038 | 1.143 | 0.736 | 0.275 | 0.372 |
| Raw | 7383.907 | 11838.190 | 6010.807 | 6117.303 | 798.078 | 1167.341 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest21 | ABC14156 | 338 | 3e-25 | 268 - 327 | 100 | 60 / 60 | plus | ABC14156 |
| Harvest35 | U35_7145 | 338 | 3e-25 | 268 - 327 | 100 | 60 / 60 | plus |
Contig Sequence (338 bp)
>U35_7145 338 Hv_44K_v2 GCACGAGGGAGAAACTAGTCTCGAATTCTTTCGGGTTTGGTGGAACCAACGCGTCGCTGC TGTTCTCGTGCCCGCCCTAGCGATCCAACATCACGCTCCCTCTCCCTTTTTAACCCCTTC GATTCGAAGAGGCATACCAGAATGTTGAGAGTTTTTCTGTCCGTGAACTTAAACGGGGAA GGCACCATCCGCGTTGAGCAGGATTCGGCGGTTTCAGGCACCGACCATTGTGCTGTGCTC CCTTGAGTCCGGAGGATTGCCTAACTTGTGGGCGTTGACTCGTAGGCCTGTGAAATTTTA CAGTACGAGAATTTATCGCTGAAAAAAAAAAAAAAAAA
Homology of Contig U35_7145 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |