- Probe CUST_37027_PI390587928
- Source Contig U35_7171
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_37027_PI390587928 | Hv_44K_v2 | TCTCGTTCGACGGCAGATGGTGACTGTGGATACGAAGGAGCAGGAGGACGAGGCGTCCGA | 387 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_74484.9 | 2727 | 2e-24 | 2208 - 2267 | 100 | 60 / 60 | minus | ABC23027 ABC25086 ABC47063 |
| MLOC | MLOC_74484.1 | 2036 | 2e-24 | 1915 - 1974 | 100 | 60 / 60 | minus | ABC23027 ABC25086 ABC47063 |
| MLOC | MLOC_74484.6 | 2611 | 2e-24 | 2131 - 2190 | 100 | 60 / 60 | minus | ABC23027 ABC25086 ABC47063 |
| MLOC | MLOC_74484.11 | 1262 | 2e-24 | 1188 - 1247 | 100 | 60 / 60 | minus | ABC25086 ABC47063 |
| MLOC | MLOC_74484.2 | 1431 | 2e-24 | 896 - 955 | 100 | 60 / 60 | minus | ABC25086 ABC47063 |
| MLOC | MLOC_74484.10 | 1373 | 2e-24 | 845 - 904 | 100 | 60 / 60 | minus | ABC25086 ABC47063 |
| MLOC | MLOC_74484.7 | 1087 | 2e-24 | 919 - 978 | 100 | 60 / 60 | minus | ABC25086 ABC47063 |
| MLOC | MLOC_74484.3 | 1555 | 2e-24 | 1020 - 1079 | 100 | 60 / 60 | minus | ABC25086 ABC47063 |
| MLOC | MLOC_74484.4 | 2544 | 2e-24 | 2009 - 2068 | 100 | 60 / 60 | minus | ABC23027 ABC25086 ABC47063 |
| MLOC | MLOC_74484.5 | 1512 | 2e-24 | 977 - 1036 | 100 | 60 / 60 | minus | ABC25086 ABC47063 |
| MLOC | MLOC_74484.8 | 1046 | 2e-24 | 752 - 811 | 100 | 60 / 60 | minus | ABC25086 ABC47063 |
| JLOC1 | JLOC1_49635.3 | 1289 | 8e-25 | 470 - 529 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_49635.2 | 1297 | 8e-25 | 435 - 494 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_49635.1 | 2404 | 8e-25 | 429 - 488 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC14630 | 539 | 3e-25 | 388 - 447 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_7171 | 541 | 3e-25 | 388 - 447 | 100 | 60 / 60 | plus |
Contig Sequence (541 bp)
>U35_7171 541 Hv_44K_v2 ATCCCTTCCTCGCCTCCTCCCCGATCCAGATCCCTTTGTCGCCTCCTCCCCGATCCAGAT CCTTCGCCGGCACGTCCCTCCGTTGACAGCCTCCACCGGTGTGCCTCGCCGGGTCCCGTC TGGTGCCGCCGCCTCAAGACCTCCTCCCCGCCCCCGTCGTCGCATCCCACCGCTCCCGCT GCATTCGAAGTCGTCGTTTTCCCGATCCCCTCCCCTTCCCCTACTTTGAACACCCCATCT CCGTCGAGCCGCACACCTCCCTCCTCCAAACCCTAGCCGTCGCCACTTTCTCCTCTTCAT CCTGCAAGCAGCACGACGACTTCCCCCTACCGCTTCCTTCCCCCTACCGCTACTCCTCCT CGCCGGCGGTGACTCCTCCCCGGTCTATCTCGTTCGACGGCAGATGGTGACTGTGGATAC GAAGGAGCAGGAGGACGAGGCGTCCGAGGAGCCTGTGCCGCACGTGCCGTGGATGCGGCA CCCCATCGACATCGACTCCTTCTTCGCCTGCCCCGTCGCGAGCCTCCCCCGCCTTGACCC C
Homology of Contig U35_7171 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |