- Probe CUST_36989_PI390587928
- Source Contig U35_12211
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_36989_PI390587928 | Hv_44K_v2 | TCGAAGTGTTGTTGAGAAGTTGCTAGATGTTCTTAACACCCCATCAGAGGCAGTTCAGAG | 340 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_60939.11 | 1257 | 2e-24 | 378 - 437 | 100 | 60 / 60 | plus | ABC13251 ABC40248 |
| MLOC | MLOC_60939.8 | 1532 | 2e-24 | 400 - 459 | 100 | 60 / 60 | plus | ABC40248 |
| MLOC | MLOC_60939.12 | 2682 | 2e-24 | 450 - 509 | 100 | 60 / 60 | plus | ABC13251 ABC40248 |
| MLOC | MLOC_60939.13 | 1709 | 2e-24 | 450 - 509 | 100 | 60 / 60 | plus | ABC13251 ABC40248 |
| MLOC | MLOC_60939.9 | 2997 | 2e-24 | 683 - 742 | 100 | 60 / 60 | plus | ABC13251 ABC40248 |
| MLOC | MLOC_60939.3 | 4731 | 2e-24 | 2498 - 2557 | 100 | 60 / 60 | plus | ABC13251 ABC40248 |
| MLOC | MLOC_60939.1 | 4827 | 3e-22 | 2507 - 2562 | 100 | 56 / 56 | plus | ABC13251 ABC40248 |
| MLOC | MLOC_60939.5 | 4707 | 3e-22 | 2478 - 2533 | 100 | 56 / 56 | plus | ABC13251 ABC40248 |
| MLOC | MLOC_60939.6 | 4798 | 3e-22 | 2478 - 2533 | 100 | 56 / 56 | plus | ABC13251 ABC40248 |
| MLOC | MLOC_60939.4 | 4311 | 3e-22 | 2520 - 2575 | 100 | 56 / 56 | plus | ABC13251 ABC40248 |
| MLOC | MLOC_60939.7 | 1446 | 3e-22 | 409 - 464 | 100 | 56 / 56 | plus | ABC40248 |
| MLOC | MLOC_60939.10 | 1938 | 3e-22 | 692 - 747 | 100 | 56 / 56 | plus | ABC13251 ABC40248 |
| MLOC | MLOC_60939.2 | 4736 | 3e-22 | 2507 - 2562 | 100 | 56 / 56 | plus | ABC13251 ABC40248 |
| JLOC1 | JLOC1_39774.4 | 3251 | 8e-25 | 472 - 531 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_39774.3 | 2215 | 8e-25 | 521 - 580 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_39774.5 | 2032 | 1e-22 | 466 - 521 | 100 | 56 / 56 | plus | |
| JLOC1 | JLOC1_39774.2 | 3305 | 1e-22 | 530 - 585 | 100 | 56 / 56 | plus | |
| JLOC1 | JLOC1_39774.1 | 2332 | 1e-22 | 530 - 585 | 100 | 56 / 56 | plus | |
| JLOC1 | JLOC1_13466.1 | 4149 | 6e-21 | 3876 - 3931 | 98 | 55 / 56 | plus | |
| Harvest35 | U35_12211 | 517 | 3e-25 | 341 - 400 | 100 | 60 / 60 | plus |
Contig Sequence (517 bp)
>U35_12211 517 Hv_44K_v2 TTGAGATCTTGGTCCTGATGTTGAATTTGGAGATACAAACTGGCTCGGAAGACAGGGTAT TGCATTACCCTCCACTCAGTTGCAGATGCTTTAAGTTCTAAAGATCTTCCCATTGCCATG ACATTTCCTATATCACGTGGCTTGGCTGATCATAATCTGGACGTTTGCGGTAGAATGATT AATGCTGGCATCCTTATTATTGATAAACATGGAAAGGAAAATGTTCCTTTGCTGCTTCCT ATTTTTGAGAGCTACTTGAATAAAAGGGCATCAAATGAGGAAACATGTGATCTTGTCAGG GAAGGCGTTGTTATATACTGGTGCTCTAGCAAAACATCTATCGAAGTGTTGTTGAGAAGT TGCTAGATGTTCTTAACACCCCATCAGAGGCAGTTCAGAGACCGGTGTCAGACTGTCTGT CTCCACTTATGCTCTCAAAGCAGGTGAGGTTGCTTGCTGCTGCTAGTGCCCGACAGTGAC GTCAATGGTCATGATGTAAGGTGCTGTGAGGGAAACA
Homology of Contig U35_12211 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |