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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_36920_PI390587928Hv_44K_v2CCCGTGTTGTTGATGCCTGATTCGTGGATCTTAAATGAAATGAGATTAAGGCCCAGTTCG556GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36271527752e-241425 - 148410060 / 60minus ABC04144 ABC04430 ABC04431 ABC15220 ABC31625
MLOCAK36502646152e-24607 - 66610060 / 60plus ABC04430 ABC04431
MLOCMLOC_15471.18697e-23692 - 7519859 / 60plus ABC04430 ABC04431
MLOCMLOC_15472.14973e-21444 - 49710054 / 54plus ABC04430 ABC04431
JLOC1JLOC1_10616.18194e-23529 - 5889859 / 60plus
Harvest21ABC044315133e-25432 - 49110060 / 60plusABC04431
Harvest21ABC044306373e-25557 - 61610060 / 60plusABC04430
Harvest21ABC292273868e-21335 - 38610052 / 52plus
Harvest35U35_13065193e-25439 - 49810060 / 60plus
Harvest35U35_13056693e-2548 - 10710060 / 60minus
Harvest35U35_13046373e-25557 - 61610060 / 60plus
Harvest35U35_297733868e-21335 - 38610052 / 52plus



Contig Sequence (637 bp)

>U35_1304 637 Hv_44K_v2
CTCTCTCCGTCAATCTTTCTCCCGTCCCCCAAATCTCTCTACCTCGGAGCGGCCATGACT
CATATCCTTCACCGCGAATAAAAATTGCCTTCTCTGTTCATCTAGTTTCATTGATCCCTG
TCGAAAATTCTATATTTTTCGTTGTTACCGTATGCGTGTTGTGGTTGGATCTGTACTTCT
CTGTTCTGTACGTGTTGTTCCTTGACCTGGGCTGGCGGCTGCACGCGGCGACCAGAGGGA
GCGGGACAGGCAGAGGGCGCAGGCGCGGAAGCCGGGGAGCAAGGGCCGCGACGACGGGCT
CACGCCGGAGCAGCGACGAGAGAGGGACGCCAAGGCGCTGCAGGAGAAGACCGCCAAGAA
GGCGGCGCAGGCAACGAAGGGGGCCGACGACGCCAAGAAGAACGCCGCCGGCAAGAAATA
GTAGCACCCGGGTTCCGTCCCTGCGGCATGTTGGATCTGGTCTGTCATGACGTCGAGATG
TTCTGATGTAAAATTCTGTCCGATCTGGTCGCTCCCTGCTTGTAACACAAACTCGTTCAG
CGCCTCCAGATCGGCCCCCGTGTTGTTGATGCCTGATTCGTGGATCTTAAATGAAATGAG
ATTAAGGCCCAGTTCGTTTTAAAAAAAAAAAAAAAAA



Homology of Contig U35_1304 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None