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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_36893_PI390587928Hv_44K_v2CCTGTATTTCGCGTTACATTATACGCTGTATGAGACATATAATCTGCTATACCTTGCATA2034GeneList: yellow
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.9372.2251.0250.9070.3580.436
Raw 826.678973.330397.546552.29576.244103.112



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK252584.121412e-242050 - 210910060 / 60plus ABC04208
MLOCAK36484827752e-241145 - 120410060 / 60plus ABC04207 ABC04208 ABC04209 ABC08129
MLOCMLOC_16607.216222e-24450 - 50910060 / 60plus ABC04207 ABC04208 ABC04209
MLOCMLOC_16606.419222e-241424 - 148310060 / 60plus ABC04207 ABC04208 ABC04209
JLOC1JLOC1_11447.216518e-25890 - 94910060 / 60minus
JLOC1JLOC1_11446.129968e-251947 - 200610060 / 60plus
Harvest21ABC0420826433e-252035 - 209410060 / 60plusABC04208
Harvest35U35_133526433e-252035 - 209410060 / 60plus



Contig Sequence (2643 bp)

>U35_1335 2643 Hv_44K_v2
GGTTCTTTCTTTCTTTCTCCCCACGCCTCGCTCTCGATCTCCTCCCTCCTTCCCTCCTCC
CCTCGCGGCCCCGCCTCGTCTTCCTCTCGCTTTGCCCGCCTGGAGCCAGACTCGATCGCA
TCGCGTCACATCCGAGGGAGGCAAAACCCTAGGCAAGATCCCTCGCAGACCTTCCTTCCG
CGGCGGAGATGCAGGGCGGCAACCACATGCTCCTCGAGGAGCCCGTCCGCCTCGCCTCCG
TCCTCGCCCCCGCCAAGCCCAAAGTTTTCCCATCCCTCACTAAGATTGTTGGGACGCTTG
GGCCCAACTCGCATTCTGTCGAAGTTATTGAAGAATGCCTCACTGCTGGGATGTCAGTTG
CACGGTTTGATTTCTCTTGGAAGGATGCTACTTATCATCAGGAGACCCTCGACAATCTGA
GGAAAGCGGCACAGAATGTGAAGAAGTTATGTCCTATAATGCTGGATACAGTGGGTCCAG
AAATTCAGGTTCACAATCCAACTGGTGGAGCAATCGAGTTGATAGGTGGGAATCATGTCA
CAATAACACCAGATCTTTCTAAAGCTCCTTCGGCTGATATCCTACCAATTAAATTTGGCG
ATCTTGCAAAAGTTGTAAAGAAGGGTGATACTCTTTTCATTGGTCAATATCTTTTCACAG
GAAGTGAAACAACATCTCTATGGCTTGAAGTTATGGAGACTTCTGGTGAAGAAGTGATTT
GTTTTGTGAAGAACACAGCTACACTGTCGGGGCCCATTTTCACTCTACATGTTTCACAAG
TACATATCAGTATGCCCACTTTGAGTGAATATGATAAACAGGTCATATCAACATGGGGGT
TGGATAACAGTGTTGACATTATATCGCTTTCCCATACCCGCTCTTCTGAGGATGTCAGGG
AGCTTAGAGCCTTTTTACAATCTCATAATCTTCAAGACACACAGATATATGCGAAGATTG
AAAATGCCGAGGGTTTGGAACATTTTGATGAAATTCTCCAAGAGGCGGATGGTATCATTA
TATCTCGAGGAGACCTGGGAATCGACCTCCCACCAGAGAGGGTGTTCATGTCCCAAAAGA
CTGGTATTCATAAATGCAACATGGCCGGCAAACCTGTGATCATTACCAGAGTTGTGGACA
GCATGATTGACAATCTTCGCCCTACTCGCGCAGAAGCGACTGATGTTGCAAATGCCGTCC
TAGATGGAACTGATGGTATTTTGCTTGGTGCGGAGACACTCCGAGGGCAGTATCCTGTTG
ACGCCGTGAGTACTGTGGGCAGAATATGCGCAGAAGCTGAGACCGTGTATAACCAGTCGC
TTCACTTCAAGAAAGTAGTGAGGCATGTAGGTGAACCAATGGCCCATGAAGAATCTGTGG
CATCATCAGCGGTTCGTTCTGCAATGAAAGTAAAAGCTGCTGCGATTGTTGTGTTCACCT
TCTCAGGGAGAGCTGCCAGGTTAGTTGCTAAATACAGGCCACCAATGCCAGTTTTAGCAG
TTGTGTTCCCACGCGAGGGCTCTGATCCATCAAAGTGGCGTTCTTATGGCACAACGCAGG
CGAGGCAATGTTTTTCTGTGAGAGGTGTGTACCCTTTGATGGGGAGTACTGACGAGGCTG
AAACCGGTGGGCTCACCAAAGAAGCATACGGGATAAAACTTGCACTAAACTATGGCCGGT
CAGTCGGCATAATAAAGCCATACGACAGGGTGATTATTTTTGAAAAGATCGGTGATTCTT
CTGTTGTCAAGATCATCGAGTGCGACGATTCTGAAAGATGAAAGGCTGTTTCTCAGGCAA
CAGTCTCAACTACACGCTTGAGTTTCCCTCCTCCTTTTGTTCTCCATTCACTTTGACCAG
AGATAAAGAGTAGTACAGCACGACAAGGTTGTCCTGTTTAGCACTTTGGCACTTTAGGTT
TATATATATACTTGTTGCCCTAATAAGGTGAAGAGAACTTCTCAGACACTCGAACATCCA
AGTTTTTGACAAAATTATAGGATTGTTGAGATAATAACTATGAGTGATTCCTAGCCTGTA
TTTCGCGTTACATTATACGCTGTATGAGACATATAATCTGCTATACCTTGCATATACTAT
ACCGTTTGTGTCTATAGTCCAGTACTAGTATCTTCTCTTCTCTTCTATCAATATTGCTCC
TTGAAGAAGATGGCGTAGATGATGCAGCAGATGCTGAAGATGATGATGCCGATGTCGAAC
GTGAGGGCGGTCATGGCCTGGTCGCTGAGCTCCATGTTCTTCCCGCCAAGGCGATCGACC
GTGTCCGGCACGGGCTTGTAATTCTGGAGGTCGAGCTCGTAGGGGTCCTCGAGGCGGGAC
CTGAGCTGCTGCAGCCGACGGCTCTCGGCCTCCTGCGCCAGCGTCCAGTCGTAGAAGCGG
CGGCTCTCCTCCTTGCTAAGCACCTTGTACACCTCCCGCAACCGGATGAACTTCTCCGAC
GCCGACTTGAGCGGCAGCCTCGTCGTGTCCGGGTGGTACTCCTTGGACAACCGCCGGTAC
GCCGCCTTGATCTCCTCCAAGTCGGCGCCAGGCGCTACTCCTAGGAACTGGTAGTGTGAC
TCGGACGGGTTGTTGATGAGGTCGGCGAAGCTTCGTCCCAGCGGCTTCTCCTTGCGCCCG
TCG



Homology of Contig U35_1335 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os11g10980.15280.0protein|pyruvate kinase, putative, expressed
Brachypodium v1_2Bradi4g22230.15300.0
Arabidopsis v10AT2G36580.15270.0Pyruvate kinase family protein | chr2:15339253-15342781 FORWARD LENGTH=527