- Probe CUST_36658_PI390587928
- Source Contig U35_7598
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_36658_PI390587928 | Hv_44K_v2 | TACCCAAAGATATGTTTTTGTAAGCCCGTAATTCTTGTAAGGACAACGCTACCCAGCGGC | 341 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_82030.1 | 350 | 2e-24 | 118 - 177 | 100 | 60 / 60 | plus | ABC15936 |
| JLOC1 | JLOC1_54558.1 | 1461 | 8e-25 | 1331 - 1390 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC15936 | 520 | 3e-25 | 121 - 180 | 100 | 60 / 60 | minus | ABC15936 |
| Harvest35 | U35_7598 | 521 | 3e-25 | 342 - 401 | 100 | 60 / 60 | plus |
Contig Sequence (521 bp)
>U35_7598 521 Hv_44K_v2 CCGGCCCCGGCCATCGCCATCGACTACTGGCGCCTCCCCGCCGACGCCAGGCTCAAGGAC GTCGTCATCGCCGTGCGCGCCGACGAGGCGCATCACCGCGACGCCAACCACTACGCATCC GACATCCATTACCAGGGAATGACGCTGAATCAGACGCCTGCGCCGCTCGGGTACCACTAA TAATCAGTTCAATGAACCATAGATCGATATGGCTTCTCAGTCCACGCTGTTACGTGCTAC CGCTGCCGCCGATGTTCGTCCCGTTAATTTGGATGGATTGTTGCGTGCGCAGTATGTTTA TGTAAACGGTTTATGTCTGATGAGTTCTGTTTGTCACTTTGTACCCAAAGATATGTTTTT GTAAGCCCGTAATTCTTGTAAGGACAACGCTACCCAGCGGCGCCGCACTTGCGTCCTGCG GTGTGCGGTGCGGCGGCCGAACTAATCATCATTCTAATAAAAAGTAAACGGGTTTTTTTG GGTTTTTTTTTTTTTTAATGCTTTAAAAAAAAAAAAAAAAA
Homology of Contig U35_7598 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |