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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_36617_PI390587928Hv_44K_v2GGGGAAGCATTCTGCAATTTGTCTGAGATAGTCACAAAGTTCAACCATAGCCTGACTTTG548GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_62183.420762e-24556 - 61510060 / 60plus None
MLOCMLOC_62183.222522e-241509 - 156810060 / 60minus None
MLOCMLOC_62183.124072e-241541 - 160010060 / 60minus None
MLOCMLOC_62183.324882e-241509 - 156810060 / 60minus None
MLOCAK35903129583e-21498 - 5579758 / 60plus None
MLOCMLOC_12592.114863e-21819 - 8789758 / 60minus None
MLOCMLOC_12592.213513e-21715 - 7749758 / 60minus None
JLOC1JLOC1_40672.225588e-25762 - 82110060 / 60plus
JLOC1JLOC1_40672.124568e-25657 - 71610060 / 60plus
JLOC1JLOC1_8454.114012e-21564 - 6239758 / 60plus
Harvest21ABC405386113e-25549 - 60810060 / 60plus
Harvest35U35_436336113e-25549 - 60810060 / 60plus



Contig Sequence (611 bp)

>U35_43633 611 Hv_44K_v2
CAGCTCTCCCTCCCTCTCTCTCTGTCTCTCCGCCCCCTCAGCTCTCAAACAAGTCCACTC
GTTTCAAAGTTCAAACTCAAACTCCTCCGGCCGCTCCAGGTCCGAGATCGGGGATGGGGG
GCTGCTTCTCCGGCGACGTGCGCGGCGGCATGGAGGCCGTCGGAGGCGGCGGCAGCGTGG
GCGCGCCGTCCCGCGGGCCGCCGGCGGCGGGGGCCAACGAGGCCGTCGACCACTTCTTCC
AGGGCCAGGCGCTGCGCCTCTACACCCCTCTCGAGCTATCTTTTTCAGCTTCCAAGTTGA
GAAATATGGATGCTCTTTCTAAGAGTGATCCTATGTTGGTGGTTTACTCAAAAATGAATG
GAAGGCTAGAAGAGATTGGCCGCACTGAAGTGATATCGAATTCACTGGAACCATTGTGGA
TCACAAAAGCTATGATAAATTACCAATTTGAGATTGTGCAACCGCTCGTGTTCAGGATAT
ATGACGTTGACACAAAGTACCATAACACACCACCGAAGATGTTGAACTTGGCTCAGCAAG
ATTTTCTAGGGGAAGCATTCTGCAATTTGTCTGAGATAGTCACAAAGTTCAACCATAGCC
TGACTTTGAAC



Homology of Contig U35_43633 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os05g30970.15972e-63protein|copine, putative, expressed
Brachypodium v1_2Bradi2g27267.15924e-66
Arabidopsis v10None