- Probe CUST_36609_PI390587928
- Source Contig U35_29344
Probe Details
Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
---|---|---|---|---|
CUST_36609_PI390587928 | Hv_44K_v2 | TTCTCCCCATCTCTCCTCCTCCTCTCCTCGGGTACGTACCATGGAGACGGGCATCGGATC | 1 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
---|---|---|---|---|---|---|---|---|
MLOC | MLOC_36515.1 | 2021 | 2e-24 | 14 - 73 | 100 | 60 / 60 | plus | ABC02867 |
Harvest21 | ABC28597 | 282 | 3e-25 | 2 - 61 | 100 | 60 / 60 | plus | |
Harvest35 | U35_29344 | 282 | 3e-25 | 2 - 61 | 100 | 60 / 60 | plus |
Contig Sequence (282 bp)
>U35_29344 282 Hv_44K_v2 GTTCTCCCCATCTCTCCTCCTCCTCTCCTCGGGTACGTACCATGGAGACGGGCATCGGAT CGGTGGACGGGCCCAAGGGGGCGCCGAGCGGCGCGGTGGCGTGCCCGGCGACGTTCCCGG CGTCGTCGCCCACCTTCATCGGCTCCCCGGAGGCCACGCTGGGGCGGCACTTGGCCCGGC GCCTGGTGCAGATCGGCGTGGGCGACGTGTTCGCCGTGCCGGGCGACTTCAACCTCACCC TCCTCGACCACCTCATCGCCGAGCCCATGCTGCGCCTCGTCG
Homology of Contig U35_29344 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|---|---|---|---|
Rice v7 | None | |||
Brachypodium v1_2 | None | |||
Arabidopsis v10 | None |