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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_36242_PI390587928Hv_44K_v2CTCGGCACTTTAGATTTGTAGCATGATGTTTCTAAATCCTATCCTTGAAAGCCCAAAAAA2722GeneList: red
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.0981.5731.2760.8700.3480.306
Raw 23.63551.69336.71639.7534.1344.403



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_191727933e-252723 - 278210060 / 60plus



Contig Sequence (2793 bp)

>U35_1917 2793 Hv_44K_v2
CTTTACTTGATGACAGCGTCGGCAAGGAGGTAAATTTGGAGATTGAAAGAGGTGGAGTGC
CTTTGACATTAAAGTTAGAGGTTGAGGATTTGCACTCTATAACTCCAAATCATTTCTTGG
AAGTCAGTGGTGCTGTCATCCATCCACTTTCATACCAGCAGGCTAGAAACTTCCGGTTCA
AATGTGGCCTCGTATATGTTGCGGAGGCAGGGTACATGCTCTCTCGGGCATCGGTTCCAC
GCCATTCAATTATCAAAAAGTTTGCGGGAGAGGATATTGAAAAGTTAGATGACCTTATTG
CAGTTATTTCAAAGCTGTCTAGGGGAGCACGAGTGCCTCTCGAATATGTCAAGTACACTG
ACCGTTATCGGAACAAGTCTGTACTGGTGACAATTGATCAACACGGGTGGTATGCGCCTC
CTCAGTTATACACTCGAAATGACGCAACTGGTCTGTGGAATGCAAAGTTGGCTATACCGC
TCGAATCTCCCTTTGTAGTTTCTCATCGTGCTGGCCATATGGACGCAAACTTAAATTCTG
TTTCACCTTTGACTGAATCAAGTCCTATGGATCTCAAATGCCAGCATGAGTCTGAAAATA
CGGCAGATGGATGCGTAAAAATGCAAACAGATGAGGAGATTGCCGTAGATGGATCCCACT
CTGGCGAAGATTCTATCATTGAGAAAAAAAGGCGCCGGGTGGATGAGGAGATAGCTGCTG
AGGGAACTATATCATCTTTTGGAGATTTAGATGACATAAAAGATGGTGCGTTGAGGCATC
CTTCTAGTATGGAAGGCTCTGACCTTGCTCAGACAATATCAAGTAATGCTTCATTGGCAG
AACAAGTAATTGAGCCAGCTCTTGTAATGTTTGAGGTGCATGTGCCACCAATATGCATGC
TTGATGGAGTACATTCTCAACATTTCTTTGGAACCGGCGTGATAATATATCATTCTGACT
GTCTAGGTCTGGTTGCCGTCGATAGGAATACAGTTGCTGTATCTATCTCTGATATAATGC
TCTCTTTTGCTGCATATCCCATTGAAATACCTGCAGAGGTTGTTTTTCTGCATCCTGTTC
ATAATTTTGCATTGGTTGCCTATGATCCTTCTGCACTGGGAGCTGGTGCATCTGTTATTC
GGGCTGCTAAGCTTCTTCCTGAGCCTGCCTTGCGCCGAGGAGATTCTGTCTACCTGGTTG
GGCTAAGTAGAAGCTTACAGGCTACATCAAGGAAATCAACCATAACTAATCCTTGCACGG
CTGTTAATATTGGCTCAGCTGACTGCCCACGATATCGTGCAATAAATATGGAGGTCATTG
AACTTGATACTGATTTTGGTAGCTCATTTTCGGGTATATTGACGGATGAGCAAGGAAGAG
TTCAAGCGTTATGGGCAAGCTTTTCCACCCAGCTCAAATATGGTTGCAGCACTTCAGAGG
ACCATCAATTCGTTAGAGGTATACCAATATATGCAATAAGTCAAGTCCTTGAGAAGATAA
TCTCGGGTACTCCTGGACCATTTCGTCTTATCAATGGAATTCGAAGGCCGATGCCACTTG
TCAGACTTCTGGAGGTGGAACTTTATCCAACTTTGCTCTCGAAAGCAAGAAGTTATGGAT
TGAGCGATAACTGGGTGCAGGCTCTCGCTAAGAAGGACCCTGTGCGCAGACAAGTCTTGC
GGGTCAAAGGTTGTTTGGCTGGATCAAAAGCGGAAAAGCTTCTGGAACAGGGAGATATGA
TTCTGGCTATCAACAAGGAACCGATAACATGCTTTCTTGACATCGAGAATGCTTGCCAAA
AGTTAGACCAACCTATCGATTCAGATGGTGTGCTTAACATGACAATATTTCGTCAGGGAA
AAGAAATTGACCTTGTTGTTGGAACCGATGTAAGAGATGGTAATGGTTCAACGAGGATGG
TGAATTGGTGTGGATCCATAATTCAGGATCCTCATTCAGCAGTGCGTGCACTTGGTTTTT
TGCCCAAGGAAGGTCATGGAGTTTATGTTGCTAGGTGGTGCCATGGAAGTCCCGTACATA
GATATGGCCTATATGCTCTCCAGTGGATAGTTGAAGTTAATGGGCAACCAACTCCAGATC
TGGAGTCCTTTATTCAAGTGGTGAAGGGATTGGAAGACCGTGAGTTTGTTAGGGTGAAGA
CCGTCCATTTGAACGGGAAACCACGGGTGCTCACTCTGAAACAGGACCTTCACTATTGGC
CGACCTGGGAGCTCACTTTTGAACCGGAGACCGACACATGGAAGAGGAGAACAATAAAAG
CGTTGCAGCCAACCGTGGCTTGATTTATTCTGCCTTGTTGTGATATTTTCAGTGGGCCTT
CTTTAGGAAGGCCAAGCATGGAGAGGCGAGGAACTCTGAAATGCTGTCGATGCCGGTGAG
CTAGAGTCAGGGTGGGCACTAGGATATAGTGTAATTCAATAGATGACATAAGGATTTCAT
TGCCTGTGGATAATTGGACTGCGGGGTGTGTCTTTTCTGTACCTATTTCATATATTTTTA
TTATCCTGTAGAAGCAATAAACCATTTAGCGATTTTGCTCTCGTCAAAAAAAAAAAAACG
CAAAGTACTTTGTTTGCAGTTTCTGGATATAGGGGTGATGATACCCAGTCATTCAGTTTT
TGGACCAAGCTATTCTGTATGTGAAGCTTTCCTTCCAGGACTTGGACCTTGTATCACCGA
TGTCGTGTTTGTCACACAGTGCCTCGGCACTTTAGATTTGTAGCATGATGTTTCTAAATC
CTATCCTTGAAAGCCCAAAAAAAAAAAAAAAAA



Homology of Contig U35_1917 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi3g53160.111520.0
Arabidopsis v10AT3G03380.110970.0| Symbols: DegP7 | DegP protease 7 | chr3:799720-808319 FORWARD LENGTH=1097