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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_36068_PI390587928Hv_44K_v2AACTGTAGGATCGCTCAAGATAACGCCTGAAGAAACAGATCCTGCTTGCCTGCTAAAAAA563GeneList: darkolivegreen
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0500.1000.6811.8121.2641.701
Raw 5.52919.725120.451531.013117.108174.319



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_44696.214379e-22260 - 31410055 / 55plus ABC03855
MLOCMLOC_44696.117109e-22908 - 96210055 / 55plus ABC03855
JLOC1JLOC1_28984.16525e-22579 - 63310055 / 55plus
Harvest21ABC038556343e-25564 - 62310060 / 60plusABC03855
Harvest35U35_15346343e-25564 - 62310060 / 60plus



Contig Sequence (634 bp)

>U35_1534 634 Hv_44K_v2
GCGGCAGTGGCAAACCAGTAAACGAGAAAGCTTGGCCGCAGTTGGCAGCTAGAGCAGCGA
GAAGAGGAGGAGAGCGTCGTCGACCATGTGGCCGGAGATGAAGGCGTGGGCCTCCATGGC
CGACGACCCGCTGAAGCGTGCGTCGTCGTCGGCGACGAGCCCGTCCAGCCCCATGCGCCG
CGTCAGCCCCACCACCATGGCGGTCGGCGGCCTCCTCGCCGTCGGCACCGTCGGCTACTT
CATGCTCATGGGCAAGGACGACAGGCACAACGAGCGCCTGGCTCACCGCACCTGACGAGC
CGTCGTCGTCGCCGGAGTCCTTTGCCGTAGCTTACCGGTAACCGCGGCATAGTAATAATA
AAACCCCCCTCCCTCCTGCTGCGTACGGTGTGTAAATCGTGTGTGTGCTCTGTTTCTGTA
CTCTTTTTATCAGTGGAACATGGAGAGATTTTACCGGGCAAAAAAAAAAAAAAAAAGATT
TTCTGAACTTTAGTACCGAACGAATGCAGAGAGTTGTATGTCCTTTACTGTAAGGAAGGA
TACACGCATCTACTGAATCATCAAACTGTAGGATCGCTCAAGATAACGCCTGAAGAAACA
GATCCTGCTTGCCTGCTAAAAAAAAAAAAAAAAA



Homology of Contig U35_1534 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None