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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_35637_PI390587928Hv_44K_v2CCGTCCTCGTGTGCCTTCCCCGTCTTATCTACATATATATACTCCTGTGTATGTAGACAA543GeneList: darkolivegreen
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.2210.2920.6781.8031.6772.156
Raw 5909.02711492.30024729.56799984.90033068.00046551.967



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_60233.16432e-24551 - 61010060 / 60plus ABC01456 ABC32055 ABC49666
JLOC1JLOC1_39258.19278e-25715 - 77410060 / 60plus
Harvest21ABC014576993e-2597 - 15610060 / 60minus
Harvest21ABC014555313e-25450 - 50910060 / 60plus
Harvest21ABC014497313e-25544 - 60310060 / 60plus
Harvest21ABC320554881e-2339 - 989859 / 60minusABC32055
Harvest35U35_149355313e-25450 - 50910060 / 60plus
Harvest35U35_149347523e-25544 - 60310060 / 60plus



Contig Sequence (752 bp)

>U35_14934 752 Hv_44K_v2
GATCGGAGACACATAGCAGAGCAGATAACCAACTCGAGGGAGATGTCGTGCTGCGGAGGC
AACTGCGGGTGCGGATCCGGCTGCAAGTGCGGCAACGGCTGCGGAGGGTGCAAGATGTAC
CCTGGGATGGACGAGGGGGTGAGCACCACCGCCACCTCCTCCCAGGCCCTCGTCATGGGA
GTGGCGTCCTCCAAGGGCAACGGGCCCTCGTTCGAGGCCGCCGCCGCCGAGAACGGCGGG
TGCAAGTGCGGCCCCAACTGCACCTGCAACCCGTGCACCTGCAAGTGATCAGTCGAATCA
ACACATGGAGACGGCATGGATGGATGGACGGACCTGACGAAGGAGCACTACAGTACGAGT
AGTAGTAGCCATCCATGAATCGCGAGTGTGTGTTTCGTTTTTAATTGCCACCTACTAGAA
TAAGACGGGATCTATCGTATCGTAATCGTATCGAGCTAGTCAACGGATTATGTGTACGTA
CCCCTTGTGGCTTGTACGGTGTTTTGTGTTGTGTTGTCATGTGCTTCTCCTACCGCTTTA
GTTCCGTCCTCGTGTGCCTTCCCCGTCTTATCTACATATATATACTCCTGTGTATGTAGA
CAATAATAATTTGGAGTTTCTGTCTTTTTCTTTTTAAAAAAAAAAAAAAAAAAATGTGTC
TTGTTTCTATCATAAAGATCAAAGTATAAATCACATAAGAAAACATATCTGCGTTTGACC
AAAAAAAACAACAAAAAAGGTCGAGGGGGGGC



Homology of Contig U35_14934 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None