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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_35543_PI390587928Hv_44K_v2GCATTTGAATCCTTTGTTGTTTTAATCACTGGATGCCAAATTCACGCCCCACACAAAAAA2695GeneList: darkred
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.8862.2712.7731.4190.3700.373
Raw 277.6701166.1351193.753948.05388.84796.895



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_1704927623e-252696 - 275510060 / 60plus



Contig Sequence (2762 bp)

>U35_17049 2762 Hv_44K_v2
ACACTTCCAGCTCCAGAGCTTCTCACGATGTGGTGCCATGGCAGGAGATCCGCGCTCTTC
GCCGTGGCCGTCGCGGCCATCTTGGCGGCGGCGGCGGCGGCGGGGGAGGTCGTGCACGAC
GGCCGGAGGACGTACATCGTTCACTGCTCGCACGCGGCCATGCCCAGCGAGTTCGCGGCG
CACGCCGACTGGTACGCGTCCTCGCTGCAGTCCGTGTCCGGCGGCGCCGCCGCGGTGATC
TACACCTACGACACCCTTCTCCACGGCTACTCGGCGCGGCTCACCCGCGCGGAGGCCCGG
GCGCTGGAGGCGCAGCCCGGCGTGCTGCTCGTCAACCCGGAGACACGGTACGAGCTGCAC
ACCACCCGCACCCCGGAGTTCCTCGGGCTGGACCGGGCGGAGGCGCTGTTCCCCGAGTCC
AACACCGCCAGCGACGTCGTCGTCGGCGTGCTCGACACCGGCGTCTGGCCGGAGAGGGCC
AGCTACGACGACGCCGGGTTGGGACCCGTGCCGGCGGGCTGGAAGGGCAAGTGCGAGGGC
GGGAGCGACTTCAACTCCTCCGCGTGCAACCGGAAGCTCATCGGCGCCAGGTTCTTCCTG
GCGGGCTACGAGGCGTCCAAGGGCCCCGTGGACACGTCCAAGGAGTCGCGCTCGCCCAGG
GACAACGACGGCCACGGCACGCACACCTCGAGCACGGCGGCGGGCTCCGCCATGCACGGC
GCTGACCTGCTGGGCTACGCGTCAGGGACGGCCAAGGGCATGGCGCCCCGCGCGCGCGTG
GCCACGTACAAGGTGTGCTGGGTCGGCGGCTGCTTCAGCTCCGACATCCTCAAGGGCATG
GAGGTCGCCGTCGCCGACGGCGTTGACGTGCTCTCCCTCTCCCTCGGCGGTGGCACGTCT
GACTACTACCGCGACAGCATCGCCGTGGGCGCGTACAGCGCCATGGAAAAGGGGATTTTT
GTCTCCTGCTCGGCGGGGAATGCCGGACCGGGTGCGGCGTCGCTGACGAACGGCGCGCCT
TGGATCACCACCGTGGGCGCGGGGACGCTCGACCGCGACTTCCCCGCCTACGTCACCCTC
GGCAACGGTAACAAATACGACGGCGTCTCCCTCTACAGCGGCAAGCAATTGCCCACCACG
CCGGTGCCGTTCATCTACGCAGGGAACGCGTCCAACAGCAGCATGGGCGCGCTCTGCATG
ACAGGCACCCTCATCCCCGCCAAGGTCGCCGGCAAGATCGTCCTCTGCGACCGCGGCACC
AACGCCAGGGTCCAGAAGGGGTTCGTCGTCCGAGATGCCGGTGGTGCCGGCATGGTGCTC
GCGAACACCGCCGCCAACGGAGAGGAGCTGGTCGCCGACGCGCATATTCTCCCGGGCGCC
GGCGTAGGAGAGAAGGCCGGCAACGCCATGAGAACCTACGCGTCGTCGGATCCAAAGCCG
ACGGCCAACATAGTGTTCGCTGGCACGAAGGTTGGGGTCCAGCCGTCGCCCGTCGTGGCC
GCCTTCTCGTCGAGGGGGCCGAACACCGTGACGCCCGGCATCCTTAAGCCGGACCTGATC
GCCCCGGGGGTGAACATCCTCGCGGCGTGGTCCGGATCCGTCGGCCCATCGGGGATCGCC
GACGACCACCGCCGCACGAGCTTCAACATCATATCGGGCACGTCCATGTCATGCCCGCAC
GTGAGCGGGCTGGCGGCGTTCCTCCGCTCGGCGCACCAGGACTGGAGCCCGGCGGCCATC
CGGTCGGCGCTGATGACGACGGCGTACGCCGCGTACCCCAACGGCGACGGCCTTCTCGAC
GTGGCCACCGAACTCGCCGCCACGCCGCTGGACATGGGAGCCGGGCACGTCGACCCCAGC
AAGGCGGTGGACCCGGGGCTGGTGTACGACCTCACCGCCGCCGACTACCTGGACTTCCTC
TGCGCCATCGAGTACGAGCCGGCGCAGATCGCCGCGCTGACCAAGCACTCCTCGGACCGG
TGCAGCGCCAGCCGCACGTACTCCGTGGCCGCGCTCAACTACCCGTCGTTCTCGGCCACG
TTCCCGGCGGCCGGCGGCACGGAGAAGCACACCCGCACTCTGACCAACGTGGGGAAGCCC
GGCACGTACAAGGTGACGGCGGCCGCGGCGGCGGGCAGCACGGCGATCAAGGTGTCAGTG
GAGCCGTCGACGCTGAGCTTCAGCAAGGTGGGCGAGAAGAAGAGCTACACCGTGAGCTTC
TCGGCCGGCGGGAAGCCGTCGGGCACCAACGGGTTCGGCCGGCTCGTCTGGTCCAGCGAC
CACCACGTGGTGGCCAGCCCGATCCTGGCGACGTGGACCTGACCACCACGCCCGGCGGTA
GGTGCTGTACTAATTAGCAATGCCGTCGAGGGGAAGAACGCGGCGGGGCAGCAATGGCGC
CGCCGTTCTCGATCGGATGGATGCGTGCGTGTGTGTCGATTTGGCGTGGTGATTTACTGA
TTTGCCGTCTCATTTTCCTGCTGCCGCTTGCTTGCCAGTGCAGCCTGTGCTAGTAGTGAG
TTGTGGCAACGTGTGTGTCAACTGGGCATAGATTTGTTTGGATTTCTAAAGCATGGTGAG
TGAAGAAAGCGAGTGATTGATTGATCAAAGTTGGGTGTTAGTAGGTCCTAAACACAGACA
GATCAATGGAACCGGCGAATCTGTTCGTCGTTTGATCCTCCATGTGGCCTTGGGGGCATT
TGAATCCTTTGTTGTTTTAATCACTGGATGCCAAATTCACGCCCCACACAAAAAAAAAAA
AA



Homology of Contig U35_17049 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g55350.17650.0protein|OsSub31 - Putative Subtilisin homologue, expressed
Brachypodium v1_2Bradi1g07840.17670.0
Arabidopsis v10AT5G67360.17570.0| Symbols: ARA12 | Subtilase family protein | chr5:26872192-26874465 REVERSE LENGTH=757