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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_35540_PI390587928Hv_44K_v2ACAGAATTTCGGGTACTGGTTTGAAATGGAGAGGTGTGCATCAAAAGATAGGAGCTACGG602GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_54525.418592e-24783 - 84210060 / 60plus ABC16980
MLOCMLOC_54525.129072e-242135 - 219410060 / 60plus ABC10529 ABC16980 ABC46214
MLOCMLOC_54525.230792e-242307 - 236610060 / 60plus ABC10529 ABC16980 ABC46214
MLOCMLOC_54525.311762e-24806 - 86510060 / 60plus None
MLOCMLOC_54525.516842e-24609 - 66810060 / 60plus ABC16980
JLOC1JLOC1_35099.232388e-252135 - 219410060 / 60plus
JLOC1JLOC1_35099.134108e-252307 - 236610060 / 60plus
Harvest21ABC281736893e-25603 - 66210060 / 60plus
Harvest35U35_290206893e-25603 - 66210060 / 60plus



Contig Sequence (689 bp)

>U35_29020 689 Hv_44K_v2
GGTTCGTTGTCCCGCCTAAGCGCTCATCCTTTCTCCTCGCCCTCACTTCTCCCCGCCGCC
CAAGGAAGGGGGAGGCAAATCTCGTAGGCGTGAACCCCGCCCGTCCGTCCCCAGCCCCTC
CTCCCCGTCCGCCTGCGTCATCGCGAATTATCGCTTCCTCGAATTACAATTTGGATTTCG
TTCATGGCGCGGCGGCATTATTCGGAGGAGATTTTGCCTGCGTTTTGCTGCATCTTTTAG
TAGAACGGCGGCGCGGGGCGTTCTTTCTCTCTGCTGCTGATACCATTTGAACCGGATGCG
GCTCTATTCACCTGCAATCTGTTTGCGGCGATCTGCCTCAAGTAGTATGTATGCTCATCC
CAATCAGTTTCAAGGAGGACCCACACCCACACAGAGCATGGTCTTATGGAAGTGCTCCCG
ACCGCAGTCAAGCCGCTCTCATATGACATTGGGCTTAGCTGATTCTTCTCGTAACAAGAA
CACAAGATCTTCTGAAGCGCAGAGTCTGAAGTACTTTGTCAGCTTAGTTGGCCGACGATT
GCGTTGCGGATTATCAACCAGAGAAGGCAGTCTAAGTGTAAAGCTCGACGTGCTTTCACC
CGACAGAATTTCGGGTACTGGTTTGAAATGGAGAGGTGTGCATCAAAAGATAGGAGCTAC
GGCCGGTGGACTCTGCTNTGGCTTTTCAG



Homology of Contig U35_29020 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None