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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_35419_PI390587928Hv_44K_v2TGTGTTCTGTCACCGCTTTTACCTTCGTCAATCTCATGCAAAAAATGATAGACGAACAAT471GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_4749.327462e-241552 - 161110060 / 60minus ABC08821 ABC10382
MLOCMLOC_4749.221912e-241611 - 167010060 / 60minus ABC08821 ABC10382
MLOCAK37096924239e-22691 - 74510055 / 55plus ABC08821 ABC10382
MLOCMLOC_4749.814239e-22789 - 84310055 / 55minus None
MLOCMLOC_4749.428059e-221616 - 167010055 / 55minus ABC08821 ABC10382
MLOCMLOC_4749.919769e-22787 - 84110055 / 55minus None
MLOCMLOC_4749.721869e-221552 - 160610055 / 55minus ABC08821 ABC10382
JLOC1JLOC1_2996.227078e-25830 - 88910060 / 60plus
JLOC1JLOC1_2996.322945e-22358 - 41210055 / 55plus
JLOC1JLOC1_2996.137105e-22830 - 88410055 / 55plus
Harvest35U35_318135643e-25472 - 53110060 / 60plus



Contig Sequence (564 bp)

>U35_31813 564 Hv_44K_v2
ATAGGGTTCTGTTACTCTTGTTTTATCTGCCCGACACCGAGGAGAGGCGGCGCCGCAGCG
AGGGCGAGCATCCCGTCGAGCCTGGCGGTAGCTCCCGGTGGCCCCGTCGCCCCGGCTCTC
CGGCACCATCTACCCTGTGAGCCGCTCCCGCTTCGCTGCCTTCGTCCTAGTCCGCAGCTG
CGTCAAGGCATACGAGTTGGGATCTTACATGGCTATGCTGCCAAGTGATTCTTCACATCA
CAGAATTGTAGAAAATAGCCCCTACAGAATCACAAAGAGTGGGAATAAGAAAGCTGGCAA
ACTTAGTGCTTCATGGTATTTCAGTAGAAAGGAAATAGAAGAGAATTCTCCGTCCAAGAG
GGATGGCATTGATTTAAAGAAAGAGACTTACCTTCGGAAATCGTATTGCACTTATCTACA
AGATTTGGGGATGCGGCTCANAGCGCCACAAGTGACAATTGCTACATCTATTGTGTTCTG
TCACCGCTTTTACCTTCGTCAATCTCATGCAAAAAATGATAGACGAACAATCGCTACTGT
TTGCATGTTCTTGGCTGGAAAAGT



Homology of Contig U35_31813 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os12g30020.25442e-65protein|cyclin-T1-4, putative, expressed
Brachypodium v1_2Bradi2g22097.15841e-64
Arabidopsis v10None