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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_35397_PI390587928Hv_44K_v2AAGGACGAGAAGAAGCCGGCCAGGAAGTCCGTCCCATCGAGGAGATCCCCGAGGACAACA323GeneList: skyblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.3410.6942.6872.7961.2020.833
Raw 77.447240.138842.3231365.978215.760159.062



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37340017567e-23952 - 10129860 / 61plus ABC06347 ABC06348
MLOCAK35698216537e-23764 - 8249860 / 61plus ABC06347 ABC06348
MLOCMLOC_74635.111803e-21342 - 4029759 / 61plus ABC06347 ABC06348
JLOC1JLOC1_49754.114612e-21345 - 4059759 / 61plus
Harvest21ABC288155523e-25324 - 38310060 / 60plus
Harvest21ABC0634716016e-22748 - 8089759 / 61plusABC06347
Harvest35U35_295055523e-25324 - 38310060 / 60plus
Harvest35U35_48116396e-22786 - 8469759 / 61plus



Contig Sequence (552 bp)

>U35_29505 552 Hv_44K_v2
GATCCCTCTCCTCCTCCTCCCCCTGCCCAGCTGACACTGACCAGCCTTCCATCCGGACAG
CGTCCCACTGCCGCCGTCGCCGCCCGCCGCCCGCCGCCATGAGCTCCTCCCACCGCCACC
TCATGCGCCTGCTCGACGACCCCTTCTTCCCCTTCCCCCCGCCACCGCCTACCTCCTCCC
TCACCTCCTCCTGCCCCTTCCTCCCACCTCCACTCTCATCCCCATTCGCCTTCCCCCACG
ACGATGACGACGATGCCGACTACCCGGAGGAGCGCCGCAGGCCGGAGCAGAAGAAGGAGC
CCAAGATGATCAAGGCCGCCGCCAAGGACGAGAAGAAGCCGGCCAGGAAGTCCGTCCCAT
CGAGGAGATCCCCGAGGACAACACCGCCGGCTGCGACGCCATCCGCAGGATGCAGGGCGT
TTGCCATGGGGAACGGCAGGGGGAAGGCCAGGGAGCTGTCNCCGCAGGACGCCGCGCTGC
TCATCCAGATGAACTACAGGGCGCACCTCGCCCACCGTTCCCAGGTGCTCCGCTGCTTGC
GTGATCTTGCCG



Homology of Contig U35_29505 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None