barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_3538_PI390587928Hv_44K_v2GGGCAGGCTTGAAAATCTCAGGGTAATATGATCAAACAAGGTAATCTTGTTTGTCTAACA423GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_61581.15593e-22501 - 5599858 / 59plus ABC14069
Harvest35U35_204945553e-25424 - 48310060 / 60plus



Contig Sequence (555 bp)

>U35_20494 555 Hv_44K_v2
AAATAGGTGCTGTGGCATACATAGAATGCAGCTCCAAGACACAAAGGAACATTAAGGCTG
TTTTCGACACCGCAATCAAGGCGGTTCTTCAACCTCAAAGGCACAAGGAGGTAGCCAGAA
AGGAAACTCGGACACGCTCTAGTCGGTCAGTAAGTACTTCTGTGGGAGTTCTTGTTTCGC
GTAGCCGAGAAGAACATTCTGGAGTCTTTCCTCGGCACGATGCTCAGATGGCCCGTGGTT
GTTCTCCAAATGGGAAGACAATGGTGGTAGAAGCATCTCATTGTTAGAAGCTAGAAGGAA
CTCTTGTTCTCTCGTGCACTGTGGTGGAGCACCTTGTTGATGTAAGATAGGTACTTATCA
AGTTTTGCCTCTGTAATAAGACATGCTCTTGTGGATGATCAAATTTGAAATCTCCCACTC
CTTGGGCAGGCTTGAAAATCTCAGGGTAATATGATCAAACAAGGTAATCTTGTTTGTCTA
ACAAGTTATTTGCCTATTTTACCAGTTGTTCAGCGGCCGCTCGAGCATTTTGAAAAGGGC
CCAATTCGCCCTATA



Homology of Contig U35_20494 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None