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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_35378_PI390587928Hv_44K_v2CTCCGTCGTCGGCCTGCCGCAGGACTGCGGAGTCCCGCGGAAGGAGGAGCCGGGGATGAG273GeneList: None
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.9420.9940.6970.5711.3021.159
Raw 3.3565.7763.2754.2483.5943.924



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36523815342e-24278 - 33710060 / 60plus ABC21171
Harvest35U35_318295893e-25274 - 33310060 / 60plus



Contig Sequence (589 bp)

>U35_31829 589 Hv_44K_v2
AAGAGCCAAACACCACATCACCACCACCACCACCACCACCACACCCGCCGAGCACTGCCA
CCGTACCACCGGAGAGCTCTCAGATCGGATCGGGTTCGCCGGAGCAGAAGAGACGATGAT
GCATCGCGCCGCCGGCCTCGACCTGGGCCTCGGTCTGGGGCTGGGGCTGGGCCTCGCGTC
CCAGGGCAGCCTCACGTCCTCCACCACCACCGCCTCCTCCTCCCCGTCGACCCCGGCCTC
CCAGGCTCACGCGCACTGGACCGCCGCGCTCAGCTCCGTCGTCGGCCTGCCGCAGGACTG
CGGAGTCCCGCGGAAGGAGGAGCCGGGGATGAGGACCTCCACGTCGCCCGAGAGCGGCGT
CAGCGGCGGCACCAAGCGGGGCCTGCTGGACCGCACCGGGTCCGGCGTCTCCCGCGCCGC
CGCCGCGGGCAGCGACGAGGACGACGACGGCGGCGACGGCGCCGGCGGCCGCAAGAAGCT
CCGGCTCTCCAAGGACCAGGCCGCCGTCCTCGAGGAGTGCTTCNAGACCCACAGCACGCT
CAACCCCAAGCAGAAGACGGCGCNTGGCGACCGGCTGGGGCTGCGGCCG



Homology of Contig U35_31829 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None