- Probe CUST_35068_PI390587928
- Source Contig U35_36706
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_35068_PI390587928 | Hv_44K_v2 | CGTCGTGATCGACGACGTCGTCGACCAGAACCGGGCACTGGGTGACGCTCCTGATATGAT | 55 | GeneList: darkolivegreen MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 0.469 | 0.570 | 0.954 | 1.411 | 0.958 | 1.525 |
| Raw | 2274.967 | 4095.953 | 6330.623 | 14720.687 | 3494.253 | 6080.160 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest21 | ABC31950 | 115 | 3e-25 | 56 - 115 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_36706 | 115 | 3e-25 | 56 - 115 | 100 | 60 / 60 | plus |
Contig Sequence (115 bp)
>U35_36706 115 Hv_44K_v2 TCGGCGAGAGCGGGCGGATGGCCCTGGTGAACTACGGCGGGGACTACGGCCGCCTCGTCG TGATCGACGACGTCGTCGACCAGAACCGGGCACTGGGTGACGCTCCTGATATGAT
Homology of Contig U35_36706 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |