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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_34898_PI390587928Hv_44K_v2GATATCTAATTACTTCAATTCTCCCAGGAACTTGACTATCTTGTTGGAGCCGTTGCCAAC594GeneList: darkgrey
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.5990.6611.2551.5041.0021.033
Raw 975.7241427.6942804.7735105.1031236.7951389.617



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC324496573e-25595 - 65410060 / 60plus
Harvest35U35_369396573e-25595 - 65410060 / 60plus



Contig Sequence (657 bp)

>U35_36939 657 Hv_44K_v2
GTGAGCTCCTTGCTCTTGAAGTATGTTATGGGATGATAGCATCTTGCAACTCCGTTGTCT
TTTTGAACTGGATTAACAGCATTTATGTTTGTACATTGTTTCATGTGTGTCAATAGGTTG
TGATGGCCCCTGACTGTTCTTGNTATGAAGTTGAGAAATTGGCTGCTGCTTTGCCAGATG
GTGGTGTTCTACTTCTAGAGAATGTTAGATTCTACAAGGAGGAAGAGAAGAACGAACCTG
AGTTTGCTAAGAAGCTTGCATCAGTTGCTGACCTTTATGTAAATGATGCCTTCGGCACTG
CACATAGGGCGCATGCTTCAACCGAGGGTGTAACCAAGTTTTTGAGGCCTTCTGTTGCTG
GCTTCCTCATGCAGAAGGTATAGTAGCTGAAATGAATCTCATTGCTGCACATTATTTACT
TGAAATCTTAACTACATTGAAAGAAAAAGTATCCTTTGGTACATATGGGATTGCATATCA
GTAAATCGATCCTTTGTTATCTTTACATTTTGCAACTTTGGGCGAGATATTAGATTCGTA
CGTAGATTTTCCAAAAAGCATTGCAACAAGTAATATTTTTGAGCAAACTAACATGATATC
TAATTACTTCAATTCTCCCAGGAACTTGACTATCTTGTTGGAGCCGTTGCCAACCCA



Homology of Contig U35_36939 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None