- Probe CUST_34828_PI390587928
- Source Contig U35_48935
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_34828_PI390587928 | Hv_44K_v2 | AGGTGAGCGAGATTGGTGATTGCCCCTAGTTATTAGCATGTGCAAGAAATTATTAAAAAA | 31 | GeneList: lightcyan1 MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 0.087 | 0.456 | 1.102 | 1.324 | 1.398 | 1.369 |
| Raw | 5.186 | 53.188 | 109.367 | 183.078 | 75.457 | 81.942 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest35 | U35_48935 | 368 | 3e-25 | 32 - 91 | 100 | 60 / 60 | minus |
Contig Sequence (368 bp)
>U35_48935 368 Hv_44K_v2 GACCTGCAGCTCGAGCACATGTTGCCTTTTTTTTTTTAATAATTTCTTGCACATGCTAAT AACTAGGGGCAATCACCAATCTCGCTCACCTCGTAAACAACAAAAATATTTTTTCTATAC AGAATCATGATCTTTTCTCCAGGAGAAAAAAAAGAACAAACAAGAAAAAAAACTGGGTAT GGAGCATGAACACCGGCGCATGCATGCTACAATGGTTGGCTCTGTTGTTGGCGCCGCCGC TGCGCCGCCCAGTGATCGTATGCGTCGCTTAGGCGGCGGCGGAACCGCGCCATGTCGAGC CGCACATTCTGCCCGTCGAGATACACCTTCTTGGTGACCTGCCAGCCCTTGGCGTTGACG GCGACGGG
Homology of Contig U35_48935 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |