- Probe CUST_34560_PI390587928
- Source Contig U35_42313
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_34560_PI390587928 | Hv_44K_v2 | GAAGTGTATATGCTTGTGGGAAAACTATTTTGTCGATTTTATGTGGACCTTACCTTTTGA | 16 | GeneList: saddlebrown MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 0.125 | 0.191 | 0.887 | 1.596 | 1.095 | 1.487 |
| Raw | 157.933 | 383.083 | 1548.634 | 4164.377 | 1049.147 | 1541.744 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest21 | ABC37916 | 293 | 3e-25 | 17 - 76 | 100 | 60 / 60 | minus | ABC37916 |
| Harvest35 | U35_42313 | 293 | 3e-25 | 17 - 76 | 100 | 60 / 60 | minus |
Contig Sequence (293 bp)
>U35_42313 293 Hv_44K_v2 TTTTTTTTTTTTTTTTTCAAAAGGTAAGGTCCACATAAAATCGACAAAATAGTTTTCCCA CAAGCATATACACTTCAGTTACAAAAAGACAAAAGGGCATATACCCTGCCAAAACAAATT CTCCTTTCCTAAGCTTTGCATACCCAATTTAAAAAAAGGGAAAACTTCTATAATTCTATG TATCGGAATTCCTATAGGCGCGCCATGATTCTCACAAGGATTGAAAGTTGCAAACCCAAA GGATCTAATTGTCAATTCAAAAACATGGGTAAGGGGTAAATCACGGAGGAAAA
Homology of Contig U35_42313 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |