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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_34511_PI390587928Hv_44K_v2TCACGATTCGACCTGCAATGTTGTATGATGTTAAGTGTTGACCGACTGAAGTAATGTTGA47GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.0571.1650.9361.1580.5410.777
Raw 15.87428.11018.99034.1924.4388.996



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_349858463e-2548 - 10710060 / 60minus



Contig Sequence (846 bp)

>U35_34985 846 Hv_44K_v2
CTACTATAGGGCGAATTGGGCCCTTTCCATAATGCTCGAGCGGCCGCTCAACATTACTTC
AGTCGGTCAACACTTAACATCATACAACATTGCAGGTCGAATCGTGATGTTACAAAACAT
GTTGTTTAGGTTTTGTGCCACTATCTTCCCATAAAGAATGCCAGAAGCTTGGCACCACTT
TATCCATCCGCCTTTGATTCGATGACTCATGTCTTCATCGATATCACCAACATTCTGCAA
CGTTGACCCAAAAAATAAAAAGGTGTCCTTGTAAGGTATTACCTATCTATCAAGACTAAC
ATCCTCCTCCTTATGGCTAGTTGTACTGAAAGTTTGATACCACACCTACTCAGTTTTAGT
TCTACACTTCTTGGCCATCGTGAGCATAGGCACCGCTGGAGTTGCAGCGACTGCTCTCTT
CTCATACTGCTACCTGATGCTTGTACTTCCAGCTAGTGCCGCGGCGGCCAGCGGTGGCGG
CAGTGGACCGCGGTGCAAAATCATCTTCAACTTCGGGGACTAGCGGCCGCTAAGTAAAAT
ATTTATTATCACTGTCTTTAATCACTTAACCTCTAATCTAAAAGCATCATACTGAACATA
CAGCGTATCAGGTAATAAAGCCGTTTCGATGCTAGAAGCATTAAAAGGCAAGCTCAGCAC
AAACTCATTTTTGCCCTGTTTCAGCTTCGACGCAGAGAACTCAAACTTGTGTTCAATATT
CTGACACGCAACAGCGCTGCGGACAGCACAAGAGCCACTTCGCCAGTAAGGAATAACCCA
TGTATCTTCATATCCACCATTGACATTTACCGTCCACGGGAGGTTACTATTTAATCGATC
CTTGAC



Homology of Contig U35_34985 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None