- Probe CUST_34436_PI390587928
- Source Contig U35_46996
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_34436_PI390587928 | Hv_44K_v2 | GTGCCACGTTTGCAGGATGGTGACTCGTACGCCTTCGAATCACGTGCTATTTGCAAGTAT | 44 | GeneList: tan MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 0.330 | 0.634 | 1.656 | 1.943 | 1.013 | 0.874 |
| Raw | 62.076 | 188.155 | 418.774 | 762.487 | 143.371 | 135.005 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest35 | U35_46996 | 104 | 3e-25 | 45 - 104 | 100 | 60 / 60 | plus |
Contig Sequence (104 bp)
>U35_46996 104 Hv_44K_v2 AGCACACGAGCCCCGACCACCTAGCCAGGAACCCCTTTGTTCAGGTGCCACGTTTGCAGG ATGGTGACTCGTACGCCTTCGAATCACGTGCTATTTGCAAGTAT
Homology of Contig U35_46996 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |