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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_34360_PI390587928Hv_44K_v2TGACCTGAAGAAAAAGATTCGCCGTCTAAAGAAGTTAATCAGTTCCCTCTTGAGGCCTTA576GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_75180.244777e-233290 - 33509860 / 61plus ABC00071 ABC00091 ABC00416 ABC00568 ABC24078
MLOCMLOC_75180.416567e-23504 - 5649860 / 61plus ABC24078
MLOCMLOC_75180.345417e-233286 - 33469860 / 61plus ABC00071 ABC00091 ABC00416 ABC00568 ABC24078
JLOC1JLOC1_50143.315944e-23418 - 4789860 / 61plus
JLOC1JLOC1_50143.218174e-23641 - 7019860 / 61plus
JLOC1JLOC1_50143.118134e-23637 - 6979860 / 61plus
Harvest21ABC392016393e-25577 - 63610060 / 60plus
Harvest35U35_430436393e-25577 - 63610060 / 60plus



Contig Sequence (639 bp)

>U35_43043 639 Hv_44K_v2
GAGCGGACCGAGCTCCACCCAACTTGCAGTGGCAGCAATGGCGGCTCCTCCCCCTCCCCC
TCCCGCTCCTCTAGATCCGCAGCTGCAGACCATGGCGACGAGCGGCGCCGGCGAAGAGCA
CCACCACCACGGCCCCGGCGACGAGCCGTCCGTCCGGATCGAGGACCTTCCCACGGAGAT
TCTACATGCTATAGTGTCACTGCTCCCACTCAAAGAGGCTGTGAGGACCAGCATTCTTTC
AACAAGTTGGAAAATGCTCTGGACATTCCACTGTAATCTGTGTTTTTATGGGCCCAATGA
AACGGATCATGACCCTTCAACTTCAATGCCCCGTTTCGAATCTTATGGGCCGGACACCTT
TCGTGAAGCCATTGATGAATATCTCGAAACAAAACAGGCTAAGCTGAAAATAAAACGAGA
TAAGTTCATTGAGGATGTGAATTGTGTTATTCAACGGCATAGTGGGGTAGGAGTCAGTAA
GTTCAGCATCAGGTGTGGCCTGCACAAGGAGGACTTTGATCATCTTGACAGATGGATTAG
CTTTGCCGCTTTGTCGAGGGCGAAGATTGTAGATTTTGACCTGAAGAAAAAGATTCGCCG
TCTAAAGAAGTTAATCAGTTCCCTCTTGAGGCCTTAATT



Homology of Contig U35_43043 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None