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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_34088_PI390587928Hv_44K_v2GGCCCCTTTGTACCTTCCCAACCTTTGTAATATATAAGATTGCAAGTGGGTTTCTTGTAA15GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36433932953e-223228 - 32869858 / 59plus ABC06648
MLOCMLOC_32340.16653e-22600 - 6589858 / 59plus ABC06648
MLOCMLOC_32341.133513e-22125 - 1839858 / 59minus ABC06648
MLOCMLOC_32341.232553e-22125 - 1839858 / 59minus ABC06648
JLOC1JLOC1_21116.631951e-222989 - 30479858 / 59plus
JLOC1JLOC1_21116.539931e-223787 - 38459858 / 59plus
JLOC1JLOC1_21116.431621e-222956 - 30149858 / 59plus
JLOC1JLOC1_21116.328291e-222623 - 26819858 / 59plus
Harvest21ABC066486195e-2344 - 1029858 / 59minusABC06648
Harvest21ABC0664719168e-211862 - 19169854 / 55plus
Harvest35U35_408076083e-2516 - 7510060 / 60minus
Harvest35U35_141236265e-23518 - 5769858 / 59plus
Harvest35U35_1411919338e-211862 - 19169854 / 55plus



Contig Sequence (608 bp)

>U35_40807 608 Hv_44K_v2
TTTTTTTTTTTTTTTTTACAAGAAACCCACTTGCAATCTTATATATTACAAAGGTTGGGA
AGGTACAAAGGGGCCTTGAGAAACAACGAAGGATAGTATCACATATCTCTCTCTAATCTA
GACCTACAGAAAAATCCTTGCGAAGTCAACAAGTCATCCCAAGGAGCCTGCTGGAGCTTA
CATTAGGGCTACACCGCAACTCCAGACAGAATCAACAAATTAAGCTGCGGAGTTTTTTTT
TAGAAGAAATATAGCTAACATATAGTAGAACCCACAATAACCGAACTGTTCCACGAGTAC
CACAAATAAGCTAACCGCGCTTAATGTTTGGCCAGCCAAAAGACAAAACCGATACAGCTA
AGACGTGCCAAAACCATCCAACGACGACACTAAGATAAAAGCAACTAGACGGTGCAGGGC
ATGGACATACAACGACCCGCAGCCTTGGCGCTTAGTCGACCTCCTCCATCTTGCTCTCAC
CGGCATCATCCTCCAGGGGCGGCATGTCGGTGTCGTTCTCAGGCGCCTCATCGTCCTCAT
CAATGCTCAGGCCAAGCTTGAGCATGCGGTGGATCCTGGTGCCCAAGGTGTTGGGGTCCT
CAAGGCTG



Homology of Contig U35_40807 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None