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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_34047_PI390587928Hv_44K_v2TGTGACTCTGAATCTGATCTTGTCTGATGTGTGTGTGTGTTCCTACTAGAGGAGAGTAGG481GeneList: darkolivegreen
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.2690.2960.6081.7511.5842.558
Raw 482.107892.5031539.1197240.2772181.8173846.620



Probe Sequence's BLAST hits in Barley Unigene Datasets

This probe has no hits to the blast databases


DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence



Contig Sequence (641 bp)

>U35_18476 641 Hv_44K_v2
GCACGAGGTGGACGTGGAGATCCAGCGGCCGCGGGAGGTGGGCAGCTGCAGGGTGGTCAA
GGTGGACAAGGAGGCGTCCTGGGAGCTCTTCACCGCCCAGGCCGCCAACGAAGGCCGCAC
CGTCGCTGCTCACTTTGGGGCGTCATGGTGCGTCACGTCCCTGTCCATGAACTACAAGTT
CGAGGAGCTCGCCCAGACCCACCCCGACATGCTCTTCCTCTTCGTCGACGTCGACGATGT
CCCGGGCGTGTCTTCCAAGCTGGGGGTGAAGGCCATGCCCACCTTCTTCCTGATCAAAGG
CAAGGAGGTGATGAAGAAGATCGTCGGCGCCAACTCGGACGAGCTCCACAAGATGGTGGA
CTCCGACGACGATTCGCTCAGCTCCGCCGTTACCACTCTCCCTGACATAGTCATCGAAAA
ATAGCTGTTTTGCCGTAGTCCCTGAAACTTTTCAAACTGCTGTTCGCTTGCTTCCGGTGT
GTGTGACTCTGAATCTGATCTTGTCTGATGTGTGTGTGTGTTCCTACTAGAGGAGAGTAG
GGCGTGTGACTTGGCTACTGGCCTGCTGGCCGCTGCAACTGTGACTTGCTGCTTTCTGAA
ATGCTACTACATATAGTACATGCTAAAAAAAAAAAAAAAAA



Homology of Contig U35_18476 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os04g53740.11346e-53protein|thioredoxin, putative, expressed
Brachypodium v1_2Bradi5g22770.11342e-60
Arabidopsis v10None