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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_34028_PI390587928Hv_44K_v2GAAGTCTGTGTAACCTGGATGATTCTGACGGAATGAAGTCACAGATTCTGTTACCCCAAA803GeneList: darkred
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.0141.4171.9471.3180.4470.562
Raw 302.138650.228785.204870.28198.076135.591



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_207988763e-25804 - 86310060 / 60plus



Contig Sequence (876 bp)

>U35_20798 876 Hv_44K_v2
GCCGAGGTCGCGCAGAGCACCAACCTGAAGCGGGCGCGCAGTCTGGCGGTGTCGATGGCG
GGCAGGGCGGCGAACCTGGCGCGGGAGCTGACGACCATCAAGTCGGAGCTGCGGTTCATG
CAGGAGCGGTGCGGCCTGCTGGAGGAGGAGAACAAGCGGCTCCGCGACGGCTACGACGGC
GGCGGCGCCGCCGCCCCCGAGGAAGACGACCTGGTCCGGCTGCAGCTGGAGGCGCTGCTG
GCGGAGAAGTCGCGGCTGGCGCAGGAGAACGCGAACCTGGCCCGGGAGAACCAGAGCCTG
GTGCAGCTGGTGGAGTACCACCAGCTCACCGCGCAGGAGGAAGAAGAAGAGTTGGAGGAC
CACCTGCTCACCGCCTCCTACGAGGAGGCCATCATGCAGGGGATGCGGCTCGACTTCTCG
TCGCCGCTCGGCAAGTTCGACGGCGAGTTCGACGGGGTTCCGGCGACCCCCGGCAGCAAG
CTCGGTGTGCCTGATGAGTAGCCAGATGCCGGGAGGAGAATGAGCTGGGTGGTGGTGCGT
GCTTCAGTTTGAGCACTCTCTCCGGTGGCCAGATTTGGTGCTTATTATCTTAGATGTTGC
TTCTTCATTCTTATTTATTCAGAGGCTCTTCATAACCGCCTCAGATAGTAGAAACTGCTG
TGTGTTGTAACTGCACAGATTATTAGCATGCTCCAATGAGCTCTGAATCTTGTTATCACA
GTGCAATCCTGGGGTGGTTCTGAAGAGATGATCTCCGGGACTTAATTCTGTCTGTGTTCT
CTATTCAGACTGTGTTCCGCTCTGAAGTCTGTGTAACCTGGATGATTCTGACGGAATGAA
GTCACAGATTCTGTTACCCCAAAAAAAAAAAAAAAA



Homology of Contig U35_20798 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os04g15800.13191e-57protein|expressed protein
Brachypodium v1_2Bradi5g04057.13173e-63
Arabidopsis v10None