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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_34025_PI390587928Hv_44K_v2CTTCCTTCTGATGTTTTTTCGTTTTGTTATTATATAGCCGCATGGATTCGCATCGCAATT11GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_55999.125323e-2193 - 1529758 / 60minus ABC01615 ABC49394
JLOC1JLOC1_36176.126832e-212429 - 24889758 / 60plus
Harvest21ABC0161514746e-221064 - 11239758 / 60plusABC01615
Harvest21ABC0161023756e-222266 - 23259758 / 60plus
Harvest35U35_327716383e-2512 - 7110060 / 60minus
Harvest35U35_1447024636e-222284 - 23439758 / 60plus



Contig Sequence (638 bp)

>U35_32771 638 Hv_44K_v2
TTTCTTACATAAATTGCGATGCGAATCCATGCGGCTATATAATAACAAAACGAAAAAACA
TCAGAAGGAAGTGGAAGCAAAGAGTTCTCTACAACTCGAACAACAGACTAAGAACAGTAG
TCTCAAGTATCTGCAAATAAACCCGACCACCCCAAACCCCAAAGTAAGCAGCAGTAGCAA
TTATCCATGTCTCCCCTGCCCTACTAACCCGTTACAAAAATTGGCTCCCCCTTCCAAAGC
AAATCTACAGCTCGCCATGGTCCTCGTCGTCGACGCCGCAGCGGCCGCTCGCGGTAAAAA
TGCTCAATGTATACAAGTTCAATGCCAACCCAAGCTCTCCACAGCAGTAAAAATGTTAGT
TGCTTGGCCATTTACAACAACACACAGAACAGGCTTCATGGATACATACCATCGAACTAG
GGTGACTAGCTACTGGCTGCTGGAGACCGGAGCGCCATCTTCACTCTGCACACCTTCAAC
GGCCAGAATTTTCTTAACAACTTGCTTGGGTATGTCAAGGTCATCCTGCATGCAGCGCAG
CAAGGGGTGCGATAAGATGATGCATATCTGGCGGAACAGGACCCGGGCAAGCCCTTGGCC
GCTCTCAAGAATGTACCCCTCGTACTGGCTGACATGCT



Homology of Contig U35_32771 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None