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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_33887_PI390587928Hv_44K_v2CAATAAAAACCCTCGGTGAGCTATGGTTCACTGACTGTCCTGAGCTAAAGTTTCTTCCAG483GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_69663.453872e-243096 - 315510060 / 60plus ABC14564 ABC14565 ABC26665
MLOCMLOC_69663.552032e-243096 - 315510060 / 60plus ABC14564 ABC14565 ABC26665
MLOCMLOC_69663.652872e-243096 - 315510060 / 60plus ABC14564 ABC14565 ABC26665
MLOCMLOC_69663.148822e-243113 - 317210060 / 60plus ABC14564 ABC14565 ABC26665
MLOCMLOC_69663.334122e-243096 - 315510060 / 60plus ABC14564 ABC14565 ABC26665
MLOCMLOC_69663.733982e-243047 - 310610060 / 60plus ABC14564 ABC14565 ABC26665
MLOCMLOC_69663.258102e-243107 - 316610060 / 60plus ABC14564 ABC14565 ABC26665
JLOC1JLOC1_46179.143268e-253095 - 315410060 / 60plus
Harvest21ABC511415523e-25484 - 54310060 / 60plus
Harvest35U35_494315523e-25484 - 54310060 / 60plus



Contig Sequence (552 bp)

>U35_49431 552 Hv_44K_v2
AAGCCACTCCAGAGTTTCTGCGTGAAGTTGTAGCTCTGACAGAGCTGAGAACATTTGGTG
TCTGCAACGTGAGGAGTGAACAATCTGCTGACTTGAGCAATGCTATCACCAGAATGAGCC
ATCTTGTTCATCTCGAAATTGTTGCTGCAGCTGAGAATGAGGTGCTGCAGTTTGAAGGTC
TATATTTACCTCCAACCCTTTCTTCGCTTGGTTTAGCAGGGCAGCTAGAAAAAACATCGA
TACCTCAGCTTTTCTCTTCTTGGTCACACCTTCATAACCTCACTCGATTGCACCTGGCAT
TCTCCAATATTGATGAGCAAACCATTTTCTGTCTGCACATGCTACGTGGTCTACACTTTC
TTGAGGTAATGAAGGCTTTTGAAGGGAAGAGGTTGGAATTTTACGCAGGGTCATTTCCAA
AACTTCGGTTTCTACACATATGGGGCGCAGCACACCTTAACCAAGTTGGAATAGAAGAGG
GTGCAATAAAAACCCTCGGTGAGCTATGGTTCACTGACTGTCCTGAGCTAAAGTTTCTTC
CAGATGGCATCG



Homology of Contig U35_49431 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7ChrUn.fgenesh.mRNA.299231e-58protein|expressed protein
Brachypodium v1_2Bradi2g39847.19173e-82
Arabidopsis v10None