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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_33834_PI390587928Hv_44K_v2AACTTTTTGCTAGTGACTGTCCAACAACCTACATTCAGATTAGGTTGGCCGGTCAATCCT532GeneList: midnightblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.2660.8270.9221.2080.9752.028
Raw 4.29728.28226.09249.81915.36635.651



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
JLOC1JLOC1_24871.220978e-251142 - 120110060 / 60plus
Harvest21ABC331976513e-25533 - 59210060 / 60plus
Harvest35U35_374916513e-25533 - 59210060 / 60plus



Contig Sequence (651 bp)

>U35_37491 651 Hv_44K_v2
GTTTTAATTTGCAGGGTTGCCATCCAGATACAGAGATTCAGTGAGGGCGATCAGGCCGGG
GCTGCCCCTCTTCCTCTACAACTACTCCACCCACCAGCTCCACGGCATCTTCGAGGTAAA
ATCAATCAGAACAATCAAATTAATCTGCTCTCTTGCTTGCAGTTCGATGACAAATTAGTT
AGCGTTGAATTGATTGAACTGAACTCATCGCCTTATACTGAATCGCCTGCACAGGCCGCG
AGCTTTGGCGGAGCAAACATCGACCCGGCGGCGTGGGAGGACAAGAAGTGCAACGGCGAG
TCCCGCTTCCCTGCACAGGTAGCTTCACCTTCACCTTCACAAGGAGTACTAAGTTGACAT
CAATATAATAATTCTAAGAACACAAGTTAGCTAGAGATATCTACTCTAGCTTGACCCGGA
AGGAGATCAGATTGATGACTAGTAAAAGCAATCAATCAACTAGTTTATTGATTATTATAA
ACGGATGGAAGTTGTTGTCTTGTTTAGTTGGAACCTAGTAGATTGTCGGCATAACTTTTT
GCTAGTGACTGTCCAACAACCTACATTCAGATTAGGTTGGCCGGTCAATCCTAGGCCAAC
CACCTGTTCTTCTAGAACAAGTACACTTGTCAACACACGCTCGGTCCTTCT



Homology of Contig U35_37491 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None