- Probe CUST_33804_PI390587928
- Source Contig U35_45690
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_33804_PI390587928 | Hv_44K_v2 | AGCCTTCCCTCCAAGGGCAAAATTGATCCAAAAAATTGTAAAATCCCCCTCACTAGGGGA | 0 | GeneList: lightgreen MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 0.327 | 0.064 | 0.629 | 4.814 | 18.146 | 71.449 |
| Raw | 34.838 | 7.697 | 85.818 | 983.411 | 1291.023 | 5799.053 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest21 | ABC44851 | 157 | 3e-25 | 1 - 60 | 100 | 60 / 60 | minus | |
| Harvest35 | U35_45690 | 157 | 3e-25 | 1 - 60 | 100 | 60 / 60 | minus |
Contig Sequence (157 bp)
>U35_45690 157 Hv_44K_v2 TCCCCTAGTGAGGGGGATTTTACAATTTTTTGGATCAATTTTGCCCTTGGAGGGAAGGCT TTTTGCCTTTTGCAAGGTTTTAACTTCCAAACCTTGTTGAAACCTCATAAACCCACTTAA ATCACCTTGGATTGATGTCCAAATAGCCTTGCAACGG
Homology of Contig U35_45690 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |