- Probe CUST_335_PI390587928
- Source Contig U35_32011
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_335_PI390587928 | Hv_44K_v2 | GGTCACCAACGCGCTGTGGGAGGCGCGGTCCAGCATCTTCGAGCGCAAGATGGACGCCGG | 389 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK373886 | 1852 | 2e-24 | 386 - 445 | 100 | 60 / 60 | plus | ABC09679 |
| MLOC | MLOC_50196.1 | 492 | 2e-24 | 12 - 71 | 100 | 60 / 60 | plus | ABC09679 |
| JLOC1 | JLOC1_32052.1 | 374 | 8e-25 | 13 - 72 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_32011 | 500 | 3e-25 | 390 - 449 | 100 | 60 / 60 | plus |
Contig Sequence (500 bp)
>U35_32011 500 Hv_44K_v2 TCGAGCACTGTTGGCCTTGGCCATCAAACCTCCGTCATCTTCCCACATGGCCGGAGCCGC CTCGGGATCGCCATGGCCATGAGATCCTCGACAGCGACGTCGCTGCTCTCCAGAACCCTC CTCCTCCGCGCCACCTCCTCCTCACCCCACCTCCTCGAACCGTCCGCGCACCGGGTCCCG CGGGTCGGATCGAGGGCCGCGTCTTCGTCGTCGTCGTCGGGCGGTGGGGATCCGTCGGGC CAGGAGCCGGCGCCGGCGCCCATGGACTCCCCGATCAAGGTGTTCTCCCACCTCCGCGGC GGCGGGGCCGGGGCCGGAGGCGCGGCGATCGACGCGGGCGGGTCGGCGCGGAAGCCGCTC AGCCTGTGGCCCGGGATGTACCACTCGCCGGTCACCAACGCGCTGTGGGAGGCGCGGTCC AGCATCTTCGAGCGCAAGATGGACGCCGGNGGCAACGCCGAGGCGGGCCCGCAGACGGAG CTGCTCACCAGACCCCGCGC
Homology of Contig U35_32011 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |